Pairwise Alignments

Query, 469 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  101 bits (251), Expect = 7e-26
 Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 18/222 (8%)

Query: 254 ILSRWVHIETIYPRYLMPILASGLLLSIVIYTLQLRRTVRLRTQQLEEANQKLSYLAKTD 313
           ILS W H        ++ ++  G+ L   ++  Q+R + R+    L +A + L  +A  D
Sbjct: 291 ILSGW-HDRAFQSSLIVGLVVLGICLFGWVFVRQVRNSERIEAD-LRKAQEALELIATHD 348

Query: 314 SLTDIANRRSFFEHLEAEQTRSGS----LTLMVFDIDDFKTINDRFGHGAGDNAICFVVG 369
           SLT +ANRR F   L+ E  R       L+L++ DID FK  ND +GH AGD+ +  V  
Sbjct: 349 SLTGLANRRLFERALDVEFGRGARQRSPLSLIMLDIDFFKRYNDAYGHVAGDHCLAEVAK 408

Query: 370 CVRQALASDTYFA-RIGGEEFAIVARGKNAEESQQLAERICQRVAEKKWVVNAQHSLSLT 428
            ++         A R GGEEFA++    N   +  LAE+I + V +K  + +   +  LT
Sbjct: 409 VLKDCCHRKADLAVRYGGEEFAVLLPDTNLSGAMALAEQIRRSVIDKHIIHSGSPTGYLT 468

Query: 429 ISLGCAFYLHPARPFSLHD-------ADSLMYEGKRNGKNQV 463
           +SLGC  ++    P SL         AD+ +Y+ K NG+N+V
Sbjct: 469 VSLGCYAFV----PSSLDSIEVFIQRADAALYQAKYNGRNRV 506