Pairwise Alignments

Query, 469 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  102 bits (253), Expect = 2e-26
 Identities = 65/166 (39%), Positives = 85/166 (51%), Gaps = 6/166 (3%)

Query: 305 KLSYLAKTDSLTDIANRRSFFE--HLEAEQTR--SGSLTLMVFDIDDFKTINDRFGHGAG 360
           +L  LA TD LT  +NRR FFE   +E E+ R  + SL  ++ DIDDFK IND  GH  G
Sbjct: 165 ELQRLATTDVLTQSSNRRHFFECARIEFERARQFASSLAFLLLDIDDFKRINDTHGHQMG 224

Query: 361 DNAICFVVGCVRQALASDTYFARIGGEEFAIVARGKNAEESQQLAERICQRVAEKKWVVN 420
           D  +  V  C    L     F RIGGEEFA V  G   + ++Q+AER+ + +    +   
Sbjct: 225 DQVLQKVARCGASVLRQSDLFGRIGGEEFAAVLPGCQPDLAEQIAERLQREIERVVFTAE 284

Query: 421 AQHSLSLTISLGCAFYLHPARPFS--LHDADSLMYEGKRNGKNQVV 464
                 +T SLG  +        S     AD+ MY  KR GKNQV+
Sbjct: 285 NGERFRVTASLGLTYLRANDAELSTVFARADAAMYTAKRLGKNQVI 330