Pairwise Alignments

Query, 469 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  100 bits (249), Expect = 7e-26
 Identities = 68/173 (39%), Positives = 92/173 (53%), Gaps = 11/173 (6%)

Query: 300 EEANQKLSYLAKTDSLTDIANRRSFFE----HLEAEQTRSGSLTLMVFDIDDFKTINDRF 355
           ++   +L  LA TD LT  +NRR FFE      E  +     L  ++ DIDDFK +ND +
Sbjct: 164 KQLENELQRLATTDVLTQSSNRRHFFECAQREFELARLNGTPLAFLLLDIDDFKLVNDTY 223

Query: 356 GHGAGDNAICFVVGCVRQALASDTYFARIGGEEFAIVARGKNAEESQQLAERICQRVAEK 415
           GH  GD  +  +    R AL     F RIGGEEFA V  G   + + Q+AER+ QR  ++
Sbjct: 224 GHQEGDTVLQRIAESGRSALRRGDLFGRIGGEEFAAVFPGCAPDMAMQIAERL-QREIQR 282

Query: 416 KWVVNAQHSLSLTISLGCAFYLHPARPFSLHD----ADSLMYEGKRNGKNQVV 464
           +   +A  + S+T S G    L P  P SL      AD+ MY+ KR GKNQ+V
Sbjct: 283 QNFQSAGTTFSITASQGLT-NLGPDDP-SLETLYGRADAAMYQAKRQGKNQIV 333