Pairwise Alignments

Query, 469 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  110 bits (274), Expect = 1e-28
 Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 13/183 (7%)

Query: 284 YTLQLRRTVRLRTQQLEEANQKLSYLAKTDSLTDIANRRSFFEHLEAEQTRSGSLT---- 339
           +T++L   V LRT +LE+       LA TD LT IANR +FF   EAE  +S  L+    
Sbjct: 233 HTIELESMVALRTAELEK-------LAYTDGLTGIANRSAFFSRAEAELRKSHRLSYDVG 285

Query: 340 LMVFDIDDFKTINDRFGHGAGDNAICFVVGCVRQALASDTYFARIGGEEFAIVARGKNAE 399
           +++ D+D FK+IND FGH AGDN +  V   +   L     F R+GGEEFAI+  G +  
Sbjct: 286 ILMLDLDHFKSINDTFGHEAGDNVLKLVADTISTCLREIDMFGRVGGEEFAILVPGTDKF 345

Query: 400 ESQQLAERICQRVAEKK-WVVNAQHSLSLTISLGCAFYLHPARPFSLHDADSLMYEGKRN 458
             Q LAER+   V+      ++A+  +S++I      Y + +   +L  AD  +Y  KRN
Sbjct: 346 GMQALAERLKSAVSNTDVSFLDAEKKISVSIGY-TKIYPNESLKSALKRADENLYSAKRN 404

Query: 459 GKN 461
           G+N
Sbjct: 405 GRN 407