Pairwise Alignments

Query, 469 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 939 a.a., diguanylate cyclase from Marinobacter adhaerens HP15

 Score =  151 bits (381), Expect = 1e-40
 Identities = 126/440 (28%), Positives = 208/440 (47%), Gaps = 36/440 (8%)

Query: 49  WKPYSYLDEQGQPSGILIDFWLAFGEANHVDIEFQLMD-WNDSLEAVKLGKSDVQAGLIR 107
           W P   LDE+G+ +G+  +    F + + VD E    D W +S+ ++K GK  +    ++
Sbjct: 512 WFPLEGLDEEGRHAGLSAEVARLFSKRSPVDFELVATDSWTESIASIKQGKCQIFTMAMQ 571

Query: 108 SASRLAYLDFAEPLLTIDTQL-------YVHRTLLGDKLDTLLSGAINVSLGVVKGGFEQ 160
           +  RL +L+F EP L + T +       ++ R  +GD     L G     +GVV+     
Sbjct: 572 TPERLEFLNFTEPYLEVPTVVLGRIEAPFIER--VGD-----LRGQ---KIGVVEDYAFA 621

Query: 161 EFMQREYPQLKLIEYANNELMMSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPVKFLY 220
           E +Q  YP L L+E  N +  +   +  ELDG++     A++Y +   G  D   +  + 
Sbjct: 622 ELLQSRYPSLNLVEVPNEQAGLRQLQNNELDGYITTLATASYY-MQELGLADLKVIGRIP 680

Query: 221 SE-ELRPAVAKGNRDLLEQVEQGFAQLSSNEKNRILSRWVHIETIYP-RYLMPILASGLL 278
           ++  L  AV K    +L  +++  + L++ E+  +  +W +I    P  Y +    S   
Sbjct: 681 ADWSLSIAVRKDEPVVLGIMQKLVSSLTTQERKDLERQWRNIRLKEPVDYTLIWQLSIAA 740

Query: 279 LSIVIYTLQLRRTVRLRTQQLEEANQKLSYLAKTDSLTDIANRRSFFEHLE-----AEQT 333
           + I    +   R +      L EAN+ L+ L+ TD LT + NR  F +         ++ 
Sbjct: 741 IVIAFLLVYWNRKLNRLNHDLTEANETLAKLSVTDDLTKLGNRSYFDQEFRKSFQWCQRH 800

Query: 334 RSGSLTLMVFDIDDFKTINDRFGHGAGDNAICFVVGCVRQALASDT-YFARIGGEEFAIV 392
            SG    MV D D FK IND +GH AGD  +  +   +R+    +T   +R GGEEF I 
Sbjct: 801 HSGFAVAMV-DADHFKRINDNYGHEAGDICLQTLAELMRKHFRRETDRLSRFGGEEFVIF 859

Query: 393 ARGKNAEESQQLAERICQRVAEKKWVVNAQHSLSLTISLGCAFYL-----HPARPFSLHD 447
           A  ++  E +   E   + V EK   V  +H + LTIS+G A  +      PA    L  
Sbjct: 860 ASYEDNSEIRNRLESFRKHV-EKSCSVCGEHDVHLTISIGLATGIPGPDDSPAE--FLRQ 916

Query: 448 ADSLMYEGKRNGKNQVVFRT 467
           AD  +Y+ K+NG+N++  R+
Sbjct: 917 ADQALYQAKQNGRNRLEARS 936



 Score = 50.4 bits (119), Expect = 3e-10
 Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 17/235 (7%)

Query: 32  MSEAVERQTLTIANSKAWKPYSYLDEQGQPSGILIDFWLAFGEANHVDIEFQLMDWNDSL 91
           MSE  +  T+T+      KP+S+ D  G  SG  +D          ++  F+   W +  
Sbjct: 1   MSEQAD-DTVTVGIVGDNKPFSFDDGPGA-SGFSVDVLREVARNADLNFRFRAGSWPEIY 58

Query: 92  EAVKLGKSDVQAGLIRSASRLAYLDFAEPLLTIDTQLYVH-RTLLGDKLDTLLSGAINVS 150
           +A   G  DV  G+  S  R   + F +P     T L  + +  LGD ++TL S    + 
Sbjct: 59  DAFVRGDLDVIDGISFSDERAGNILFTKPYHLRQTYLMQNTQRPLGD-INTL-SDLKGLR 116

Query: 151 LGVVKGGFEQEFMQREYPQLKLIEYANNELMMSAAKRRELDGFVADTQVANFYIVVSN-- 208
           +G+V+  + ++ +Q E   + L  Y +   ++ A     +D  V    +  +Y   +   
Sbjct: 117 VGIVRDVYYRDALQAE--GVSLTSYDSVHSLIRALAFGWVDVIVGPRLILQYYANQAGFG 174

Query: 209 -----GAKDFTPVKFLYSEELRPAVAKGNRDLLEQVEQGFAQLSSNEKNRILSRW 258
                GA    P+  L +E+ R  V K N DL +++  G  Q+     + +L RW
Sbjct: 175 FLEIVGA---APLGELATEDFRIGVLKTNEDLYQKIAFGLEQIPKERISELLKRW 226



 Score = 35.4 bits (80), Expect = 8e-06
 Identities = 47/217 (21%), Positives = 85/217 (39%), Gaps = 13/217 (5%)

Query: 49  WKPYSYLDEQG-QPSGILIDFWLAFGEANHVDIEFQLMDWNDSLEAVKLGKSDVQAGLIR 107
           + PYS+  E G +  G+ +D      +   + +      W + L   + G+ DV A +  
Sbjct: 264 YAPYSF--ESGTRIHGLSVDILNRISDLTGLQVIPVEGQWVELLPLFRDGEIDVLANMSF 321

Query: 108 SASRLAYLDFAEPLLTIDTQLYVHR-TLLGDKLDTLLSGAINVSLGVVKGGFEQEFMQRE 166
              R A+  F +P  TI    +    TL  + L  L    + +  G+    +E+   +  
Sbjct: 322 RPEREAFTRFTKPYHTIPNVAFTRDPTLRTETLADLKDQRVALGSGIY---YEEPVREAL 378

Query: 167 YPQLKLIEYANNELMMSAAKRRELDGFVADTQVANFYI----VVSNGAKDFTPVKFLYSE 222
               ++  +   E M  A  R E+D  +A     NF+I    +          +     E
Sbjct: 379 GENARI--FTTQEAMFQALSRDEVDVVLAALPNGNFWIRELGIPGVRIAGELVLDEQTGE 436

Query: 223 ELRPAVAKGNRDLLEQVEQGFAQLSSNEKNRILSRWV 259
           +LR  V  G   L + ++   A ++  E + I SRW+
Sbjct: 437 DLRFGVRPGLAPLADILDDALAAITPEEMHTIESRWL 473