Pairwise Alignments

Query, 469 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 58/167 (34%), Positives = 92/167 (55%), Gaps = 8/167 (4%)

Query: 304 QKLSYLAKTDSLTDIANRRSFFEH----LEAEQTRSGSLTLMVFDIDDFKTINDRFGHGA 359
           +KL  +A TD LT  ANR+ F E+    L+  +    S+++++ DID FK +ND +GH  
Sbjct: 318 RKLEIMASTDKLTGAANRQVFEEYFHQALDKAKLSQTSISILLIDIDHFKKVNDSYGHSV 377

Query: 360 GDNAICFVVGCVRQALASDTYFARIGGEEFAIVARGKNAEESQQLAERICQRVAEKKWVV 419
           GD  +  V   +R  L       R GGEEF ++    +   + +LAER    +++++  V
Sbjct: 378 GDLVLKTVTNLLRSQLKPQDILCRWGGEEFLVLLPEMDLSRAAELAERFRDSISQRELKV 437

Query: 420 NAQHSLSLTISLGCAFY--LHPARPFSLHDADSLMYEGKRNGKNQVV 464
           N  H +++T+S+G A Y  L PA    +  AD  +Y+ K  G+NQVV
Sbjct: 438 NGVH-IAITVSIGVAEYQKLEPAEDL-IKRADLALYQAKEAGRNQVV 482