Pairwise Alignments

Query, 469 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 937 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  110 bits (274), Expect = 3e-28
 Identities = 103/440 (23%), Positives = 190/440 (43%), Gaps = 32/440 (7%)

Query: 41  LTIANSKAWKPYSYLDEQGQPSGILIDFWLAFGEANHVDIE-FQLMDWNDSLEAVKLGKS 99
           L +   K W P  + DEQGQ +GI  D      E   ++I+     DW+  + A++ G+ 
Sbjct: 502 LKLGYLKQWPPMEFSDEQGQFAGINSDVSQLLAEQLRINIQPVAFDDWHSLIGALRSGEI 561

Query: 100 DVQAGLIRSASRLAYLDFAEPLLTIDTQLYVHRTLLGDKLDTLLSGAINVSLGVVKGGFE 159
            +   + ++A R  +L F+EP       L      +       L+G     + VV+G   
Sbjct: 562 ALAGSIAQTAERQQFLTFSEPYWPSPWGLVSQLEQVSVFNLAQLAGQ---RVAVVEGYHL 618

Query: 160 QEFMQREYPQLKLIEYANNELMMSAAKRRELDGFV-------ADTQVANFYIVVSNGAKD 212
              +    P LKL+   + +  +SA      D F+       ++ +   + ++  +   D
Sbjct: 619 VAQLMALQPSLKLVLVPDTQSGLSAVNDGHADVFIDKVVTLASELKTGQYPLLKMSLLSD 678

Query: 213 FTPVKFLYSEELRPAVAKGNRDLLEQVEQGFAQLSSNEKNRILSRWVHIETI-----YPR 267
                  +   L P  A     L+  + +   Q+  + + +I S WV          Y +
Sbjct: 679 LADQHSHFG--LNPQYAP----LVPLINRVLGQIDQHTQQQIYSHWVSFSLTTDNSQYLQ 732

Query: 268 YLMPILASGLLLS-IVIYTLQLRRTVRLRTQQLEEANQKLSYLAKTDSLTDIANRRSFFE 326
           ++  +L   L+LS +++  L + R + L   +   A ++L ++A  D+LT + NR    +
Sbjct: 733 WIRYLLLGALVLSGVMVAVLVVNRRLNLEITRRIAAEKRLQHVASHDALTQLPNRALLDD 792

Query: 327 HLE----AEQTRSGSLTLMVFDIDDFKTINDRFGHGAGDNAICFVVGCVRQALASDTYFA 382
            L     A +       L+  D+D FK IND++GH  GD  +  V G + +A+ +    A
Sbjct: 793 RLSQALLAHRRDHSHFALLFIDLDGFKQINDQYGHPVGDALLLKVAGLLTKAIRNSDTVA 852

Query: 383 RIGGEEFAIVA-RGKNAEESQQLAERICQRVAEKKWVVNAQHSLSLTISLGCAFYLHPAR 441
           R GG+EF I+  R ++ + + Q+A+ I   ++    +     ++ + IS+G   Y     
Sbjct: 853 RFGGDEFVILLNRVQDLDAATQVADNILHSLSSPFSIEGV--TVEVAISIGVVIYPRDGD 910

Query: 442 PF--SLHDADSLMYEGKRNG 459
                +  AD LMY+ K  G
Sbjct: 911 TAIELMKKADQLMYQAKTAG 930



 Score =  108 bits (269), Expect = 1e-27
 Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 37  ERQTLTIANSKAWKPYSYLDEQGQPSGILIDFWLAFGEANHVDIEFQLMDWNDSLEAVKL 96
           + ++L +   +   PY ++D  G+ +G+L+D W  +G+  +  + F    WN+SL+ ++ 
Sbjct: 26  QTESLIVVMGEDSFPYQFVDNDGEATGLLVDLWKEWGKRTNTPLVFVARHWNESLQQLQQ 85

Query: 97  GKSDVQAGLIRSASRLAYLDFAEPLLTIDTQLYVHRTLLGDKLDTLLSGAINVSLGVVKG 156
           GK+ V  G+ ++  R    DFAEP+  + T LY+H++L G K    +   I   +G+V G
Sbjct: 86  GKAQVHIGMGQTPEREQLFDFAEPIADVSTYLYLHKSLQGKK---SIKELIPYQIGIVSG 142

Query: 157 GFEQEFMQREYPQLKLIEYANNELMMSAAKRRE------LDGFVADTQVANFYIVVSNGA 210
              +  ++R  P L    Y + E +++     E      LDG++ D   ++  I  S   
Sbjct: 143 SSHEAELRRIEPNLVFKYYESREKLLAGVAAGETVVFAGLDGYLRD-PASSQAIAGSFPI 201

Query: 211 KDFTPVKFLYSEELRPAVAKGNRDLLEQVEQGFAQLSSNEKNRILSRWV 259
               P+K +   +  PAV KGN+ L+E++ QGF  L +    +   RW+
Sbjct: 202 SARIPIKAM---QFVPAVMKGNQALVEKINQGFHSLDARFVQQTERRWL 247



 Score = 65.5 bits (158), Expect = 8e-15
 Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 6/224 (2%)

Query: 37  ERQTLTIANSKAWKPYSYLDEQGQPSGILIDFWLAFGEANHVDIEFQLMDWNDSLEAVKL 96
           ++  L +A     +P+  L   G P G  +D W  +     ++++F   D N S+  V+ 
Sbjct: 252 QKAGLVVAMQLGVEPFVDLGVDGLPHGFYVDLWQLWSAKTGINVDFISGDMNASVNDVRQ 311

Query: 97  GKSDVQAGLIRSASRLAYLDFAEPLLTIDTQLYVHRTLLGDKLDTLLSGAINVSLGVVKG 156
           G +D   G   S      L  A  L T+ ++L++++  L D     L       +GVV  
Sbjct: 312 GLADAHIGYPESDELKTGLTRAWQLYTVKSRLFLYQQQLTD-----LQSLKGKRIGVVPT 366

Query: 157 GFEQEFMQREYPQLKLIEYANNELMMSAAKRRELDGFVADTQVANFYIVVSNGAKDFTPV 216
                 +++  P + L  Y N + M++ A+  E+ GFVA     + Y++ +    +F   
Sbjct: 367 APYLVALRKALPDVTLRYYENMDSMVAGARSGEIAGFVAAGAWTSHYLLQNKAWSEFHQY 426

Query: 217 KFL-YSEELRPAVAKGNRDLLEQVEQGFAQLSSNEKNRILSRWV 259
             L +  ++       +  L +++  GF  +S  E   +  +W+
Sbjct: 427 PELEFPTDVYVLTRSDDPGLTQRITNGFRSISMQEFAEVEQKWM 470