Pairwise Alignments

Query, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., MFS permease from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (315), Expect = 2e-33
 Identities = 112/465 (24%), Positives = 188/465 (40%), Gaps = 91/465 (19%)

Query: 13  AGFCINLCLGILYAWSVFNKALVTDFGWSAADASSP-----------------------Y 49
           A   I+LC+G+ Y +SVF   L    G +   A +P                       Y
Sbjct: 36  AALAIHLCIGMAYGFSVFWLPLSKALGITKPVACAPDMSFISQVFSSQCDWPISMLGWIY 95

Query: 50  AIATIAFSVCLLVAGILQDRMGPRNILILGTTLTGLGMIASG---FASSVLMLNLTFGVM 106
            +  I       + G   +  GPR   ++       G++ S    +   + ++ +  GV+
Sbjct: 96  TLFFIFLGCSAAIWGGWLEHAGPRKAGVVSALCWCGGLLISALGIYTHQIWLMWIGSGVI 155

Query: 107 TGAGIGFGYACLSPSAMKWFHPSKKGMVNGLIAAGFGLAAIYLAPLTSALITH------L 160
            G G+G GY     + +KWF P K+GM  G+   GFG  A+  APL +AL++H      +
Sbjct: 156 GGIGLGLGYISPVSTLIKWF-PDKRGMATGMAIMGFGGGAMVGAPLAAALMSHFASPTGV 214

Query: 161 GIQTSFMILGAGVLAIAVPLACTINNPPAGYVPA--EPKLKAGQEAKVVAK--VANLSWK 216
           G+  SF+++ A      +  A +   PP G+ P    P  K    A +  +    N++W 
Sbjct: 215 GVWQSFLVMAAIYFVFMIGGALSYRVPPTGWKPEGWTPAPKKAANAMITHRHVHVNVAW- 273

Query: 217 AMLKTPQFYALWLMYALAASVGLMIIG------------------------NITNIASVQ 252
              KTPQF  +WL+  L  S G+ I+G                        + T +  + 
Sbjct: 274 ---KTPQFRLVWLVLCLNVSAGIGILGMASPLLQEVFGGKLLGNDLPFGQLDATQLGQIA 330

Query: 253 ANLPNAVYLASILAIFNSGGRVAAGILSDKIGGVRTLLLAFLL---------QGGNMVLF 303
           A    A     +L++FN GGR      SD +G   T  + F L           G++   
Sbjct: 331 A---IAAGFTGLLSLFNIGGRFFWASFSDYLGRKNTYFVFFALGFALYALIPNLGHLGSV 387

Query: 304 ATFDSEFTLIIGTAIAAVGYGTLLAVFPSITAEFYGLKNYGTNYGVLYTSWGIGGAIGAA 363
           A F + F +I+        YG   A  P+  A+ +G +  G  +G L T+W   G +G  
Sbjct: 388 ALFVAAFCIILSM------YGGGFATVPAYLADLFGTQMVGAIHGRLLTAWAAAGVLGPV 441

Query: 364 VVGY--------SMTHGGGYNLAYTISAAMMAVCILLALITKPIS 400
           +V Y         +     Y++   I + ++ +  L  L+ +P++
Sbjct: 442 LVNYLREYQLSIGVERAAAYDITLYILSGLLVLGFLCNLLVRPVA 486