Pairwise Alignments

Query, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., MFS permease from Pseudomonas fluorescens FW300-N1B4

 Score =  124 bits (312), Expect = 5e-33
 Identities = 109/461 (23%), Positives = 185/461 (40%), Gaps = 83/461 (18%)

Query: 13  AGFCINLCLGILYAWSVFNKALVTDFGWSAADASSP-----------------------Y 49
           A   I+LC+G+ Y +SVF   L    G + A   +P                       Y
Sbjct: 37  AALAIHLCIGMAYGFSVFWLPLSKALGVTKAVTCAPDMSFIAQVFSSQCDWPISMLGWIY 96

Query: 50  AIATIAFSVCLLVAGILQDRMGPRNILILGTTLTGLGMIASG---FASSVLMLNLTFGVM 106
            +  I       + G   +  GPR   ++       G++ S    +   + ++ +  GV+
Sbjct: 97  TLFFIFLGCSAAIWGGWLEHAGPRKAGVVSALCWCGGLLISALGVYTHQIWLMWIGSGVI 156

Query: 107 TGAGIGFGYACLSPSAMKWFHPSKKGMVNGLIAAGFGLAAIYLAPLTSALITH------L 160
            G G+G GY     + +KWF P K+GM  G+   GFG  A+  APL +AL+ H      +
Sbjct: 157 GGIGLGLGYISPVSTLIKWF-PDKRGMATGMAIMGFGGGAMVGAPLAAALMGHFASPTSV 215

Query: 161 GIQTSFMILGAGVLAIAVPLACTINNPPAGYVPAEPKLKAGQEAKVVAKVANLSWKAMLK 220
           G+  SF+++ A      +  A +   PP G+ P      A + +  +    ++      K
Sbjct: 216 GVWQSFLVMAAIYFVFMIGGALSYRVPPTGWKPEGWTAPAKKASNAMITHRHVHVHVAWK 275

Query: 221 TPQFYALWLMYALAASVGLMIIG------------------------NITNIASVQANLP 256
           TPQF  +WL+  L  S G+ I+G                        +   +AS+ A   
Sbjct: 276 TPQFRLVWLVLCLNVSAGIGILGMASPLLQEVFAGKLLGTDQTFGQLDAGQLASIAA--- 332

Query: 257 NAVYLASILAIFNSGGRVAAGILSDKIGGVRTLLLAFLL---------QGGNMVLFATFD 307
            A     +L++FN GGR      SD +G   T  + F L           G++   A F 
Sbjct: 333 IAAGFTGLLSLFNIGGRFFWASFSDYLGRKNTYFVFFALGFALYALIPNLGHLGSVALFV 392

Query: 308 SEFTLIIGTAIAAVGYGTLLAVFPSITAEFYGLKNYGTNYGVLYTSWGIGGAIGAAVVGY 367
           + F +I+        YG   A  P+  A+ +G +  G  +G L T+W   G +G  +V Y
Sbjct: 393 AAFCIILSM------YGGGFATVPAYLADLFGTQMVGAIHGRLLTAWAAAGVLGPVLVNY 446

Query: 368 --------SMTHGGGYNLAYTISAAMMAVCILLALITKPIS 400
                    +     Y++   I A ++ +  +  L+ +P++
Sbjct: 447 LREYQLSIGVERAAAYDITLYILAGLLVLGFICNLLVRPVA 487