Pairwise Alignments

Query, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., Major facilitator superfamily from Pseudomonas syringae pv. syringae B728a

 Score =  124 bits (311), Expect = 7e-33
 Identities = 112/458 (24%), Positives = 184/458 (40%), Gaps = 77/458 (16%)

Query: 13  AGFCINLCLGILYAWSVFNKALVTDFGWSAADASSP-----------------------Y 49
           A   I+LC+G+ Y +SVF   L    G +A  A +P                       Y
Sbjct: 36  AALAIHLCIGMAYGFSVFWLPLSKAIGVTAPVACTPDMGFFAQMFASTCDWQISMLGWIY 95

Query: 50  AIATIAFSVCLLVAGILQDRMGPRNILILGTTLTGLGMIASG---FASSVLMLNLTFGVM 106
            +  I       + G   +  GPR   ++       G++ S    +   + ++ L  GV+
Sbjct: 96  TLFFIFLGCSAAIWGGWLEHAGPRKAGVVSALCWCGGLLISALGIYTHQIWLMWLGSGVI 155

Query: 107 TGAGIGFGYACLSPSAMKWFHPSKKGMVNGLIAAGFGLAAIYLAPLTSALITH------L 160
            G G+G GY     + +KWF P K+GM  G+   GFG  A+  APL +AL+ H      +
Sbjct: 156 GGIGLGLGYISPVSTLIKWF-PDKRGMATGMAIMGFGGGAMVGAPLATALMGHFASAESV 214

Query: 161 GIQTSFMILGAGVLAIAVPLACTINNPPAGYVPAEPKLKAGQEAKVVAKVANLSWKAMLK 220
           G+  SF+++        +  A     PP G+ P      A +    +    ++      K
Sbjct: 215 GVWQSFVVMAVIYFIFMIGGALGYRVPPTGWKPEGWTAPAAKAKNSMITNRHVHVSVAWK 274

Query: 221 TPQFYALWLMYALAASVGLMIIGNIT---------------------NIASVQANLPNAV 259
           TPQF  +WL+  L  S G+ I+G  +                     N   ++A    A 
Sbjct: 275 TPQFRLVWLVLCLNVSAGIGILGMASPLLQEVFAGKLLGVDLTFSQLNADQLKAIAAIAA 334

Query: 260 YLASILAIFNSGGRVAAGILSDKIGGVRTLL----LAFLLQGG-----NMVLFATFDSEF 310
               +L++FN GGR      SD IG   T      L FLL        +M   A F + F
Sbjct: 335 GFTGLLSLFNIGGRFFWASCSDFIGRKATYFVFFALGFLLYASVPTLSHMGSIALFVAAF 394

Query: 311 TLIIGTAIAAVGYGTLLAVFPSITAEFYGLKNYGTNYGVLYTSWGIGGAIGAAVVG---- 366
            +++        YG   A  P+  A+ +G +  G  +G L T+W   G +G  +V     
Sbjct: 395 CIVLSM------YGGGFATVPAYLADLFGTQMVGAIHGRLLTAWAAAGVLGPVLVNYLRE 448

Query: 367 YSMTHG----GGYNLAYTISAAMMAVCILLALITKPIS 400
           Y + HG      Y++   I + ++ +  +  L+ +P++
Sbjct: 449 YQLAHGVARADAYDITLYILSGLLVLGFICNLLIRPVA 486