Pairwise Alignments

Query, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  135 bits (340), Expect = 2e-36
 Identities = 106/388 (27%), Positives = 180/388 (46%), Gaps = 30/388 (7%)

Query: 16  CINLCLGILYAWSVFNKALVTDFGWSAADASSPYAIATIAFSVCLLVAGILQDRMGPRNI 75
           C+ L   + YAW++F   +     W  A   + + I  +  +  + V G L D+ GPR +
Sbjct: 28  CMGLVANLQYAWTLFVVPMDNAHHWGQAAIQTAFTIFIVTETWLVPVEGWLVDKFGPRPV 87

Query: 76  LILGTTLTGLGMIASGFASSVLMLNLTFGVMTGAGIGFGYACLSPSAMKWFHPSKKGMVN 135
           +I G+    LG I    A+S+  L     V+ G G G  Y     +A+KWF P K+G+  
Sbjct: 88  VIGGSLCAALGWIIDAHANSLAELYAA-AVIAGIGAGCVYGTCVGTALKWF-PDKRGLAA 145

Query: 136 GLIAAGFGL-AAIYLAPLTSALITHLGIQTSFMILG--AGVLAIAVPLACTINNPPAGYV 192
           GL AAGFG  AA+ + P+   +I   G Q +FM  G   GV  + +        PPA  V
Sbjct: 146 GLTAAGFGAGAAVTVIPIAD-MIQRSGYQHTFMFFGIFQGVCILLLATMLIRPKPPATAV 204

Query: 193 PAEPKLKAGQEAKVVAKVANLSWKAMLKTPQFYALWLMYALAASVGLMIIGNITNIAS-- 250
             +         ++VA   + +   M+++P F+ L+LM+   A+ G++    +  IA   
Sbjct: 205 ATK---------RIVASKIDYTPGEMIRSPLFWVLYLMFVFVAAGGIIATAQLGPIAKEF 255

Query: 251 ---------VQANLPNAVYLASILAIFNSGGRVAAGILSDKIGGVRTLLLAFLLQGGNMV 301
                    +   LP      SI  + N   R   G LSD+IG   T+ + FL +G  ++
Sbjct: 256 GFAKLPVSLMGITLPLLTMTLSIDNLCNGFTRPLCGFLSDRIGRENTMFMIFLGEGVALL 315

Query: 302 LFATF-DSEFTLIIGTAIAAVGYGTLLAVFPSITAEFYGLKNYGTNYGVLYTSWGIGGAI 360
               F  + +  +   A   + +G + ++FP+  A+ +G K    N G LYT+ G    +
Sbjct: 316 GLMQFGHNPYAFMFFAAAVFLCWGEIFSIFPATCADTFGSKYAAANAGTLYTAKGTASML 375

Query: 361 GAAVVGYSMTHGGGYNLAYTISAAMMAV 388
               +   ++  GG++  + ISAA++++
Sbjct: 376 --VPLASVLSANGGWSTVF-ISAAVVSI 400