Pairwise Alignments

Query, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  135 bits (340), Expect = 2e-36
 Identities = 101/390 (25%), Positives = 180/390 (46%), Gaps = 25/390 (6%)

Query: 9   RILLAGFCINLCLGILYAWSVFNKALVTDFGWSAADASSPYAIATIAFSVCLLVAGILQD 68
           ++++   C+ L   + YAW++F   +     W  A     +AI  +  +  + + G L D
Sbjct: 20  QLVIGMVCMALVANLQYAWTLFVTPMNARHHWGEASIQLAFAIFILTETWLVPLEGWLVD 79

Query: 69  RMGPRNILILGTTLTGLGMIASGFASSVLMLNLTFGVMTGAGIGFGYACLSPSAMKWFHP 128
           + GPR ++  G    G+  + + + +++ ML ++  V+ G G G  Y     +A+KWF P
Sbjct: 80  KFGPRPVVAGGAICAGIAWVMNSYITTLPMLYVS-AVIAGIGAGGVYGTCVGNALKWF-P 137

Query: 129 SKKGMVNGLIAAGFGL-AAIYLAPLTSALITHLGIQTSFMILGAGVLAIAVPLACTINNP 187
            K+G+  GL AAGFG  AA+ + P+ + +IT  G + +F   G       + LA  +  P
Sbjct: 138 DKRGLAAGLTAAGFGAGAAVTVIPIAN-MITRSGYEHTFFFFGILQGGCILALALLLKKP 196

Query: 188 PAGYVPAEPKLKAGQEAKVVAKVANLSWKAMLKTPQFYALWLMYALAASVGLMIIGNITN 247
                    + +A  + K      + +   M+KTP F+ +++ +   A+ GLM    I  
Sbjct: 197 -------NLRSQAAPKKKFAVSKVDFTPGQMIKTPVFWVIYVSFVAVAAGGLMATAQIGP 249

Query: 248 IAS-----------VQANLPNAVYLASILAIFNSGGRVAAGILSDKIGGVRTLLLAFLLQ 296
           IA                LP      SI  + N   R   G +SDK+G   T+ + F+ +
Sbjct: 250 IAKDWGLARIPMTIFGMTLPLLTATLSIDNVCNGFTRPLCGFISDKLGRENTMFVIFIGE 309

Query: 297 GGNMV-LFATFDSEFTLIIGTAIAAVGYGTLLAVFPSITAEFYGLKNYGTNYGVLYTSWG 355
           G  ++ L     + +  +   A+  + +G + ++FP+I A+ +G K    N G LYT+ G
Sbjct: 310 GLALLGLMQYGTNPYAFMTFAALIFLFWGEIFSIFPAICADTFGSKYAAANAGTLYTAKG 369

Query: 356 IGGAIGAAVVGYSMTHGGGYNLAYTISAAM 385
               +       S T  GG+NL + +SA +
Sbjct: 370 TASLLVPIASVLSAT--GGWNLVFIVSAVV 397