Pairwise Alignments

Query, 766 a.a., 9-hexadecenoic acid cis-trans isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 797 a.a., fatty acid cistrans isomerase (RefSeq) from Shewanella sp. ANA-3

 Score =  847 bits (2187), Expect = 0.0
 Identities = 408/773 (52%), Positives = 554/773 (71%), Gaps = 10/773 (1%)

Query: 3   AGINYDQLFGTEQ--VRERQLPLHS---SQAQHFLNEVKPILDNRCVVCHACYDAPCQLK 57
           A +++D L+G      R    P+ S   +Q + + + V+PI++ RCVVCHACYDAPCQLK
Sbjct: 26  AQVDFDNLYGKSSPLTRADNQPIQSELTAQTKTYHSAVEPIINGRCVVCHACYDAPCQLK 85

Query: 58  MTSAEGIDRGASKALVYQGTRLTAATPTRLYEDAQLTQEWRAAGFHPVLNERNQTAQANL 117
           MTS+EGI+RGA+K  VYQGTRL AATP RL+ DA   + WR  GF+PVLNER QT QAN 
Sbjct: 86  MTSSEGIERGANKEKVYQGTRLMAATPNRLFVDAHTPEAWRERGFYPVLNERAQTPQANT 145

Query: 118 DAGVMARLLMQKERHPLPQQDQL-QGFDFSIDREQTCPTINEMDHFEQVNPNWGMPFGMP 176
            A V+AR+L  K+ HPLP    L + FDFS+DR Q C +I EMD +EQ  P  GMP+G+ 
Sbjct: 146 QASVLARMLTLKQAHPLPDTKLLDKSFDFSLDRVQQCASIEEMDKYEQYQPLAGMPYGLH 205

Query: 177 NLSPKEYTTLLSWLQEGAVMNQALPLSAQEQALVTEYEALLNHSSRKNQLAARYIYEHLF 236
            L+ +E+  L+ WL++GAV+     LSA+    +  +E  LN  S K QL+ARYIYEHLF
Sbjct: 206 ALNQQEHKVLMQWLEQGAVLPTPPALSAEFNQEIARWEQFLNADSLKAQLSARYIYEHLF 265

Query: 237 LSHLYFSEI--AQERPRFFKLIRSSTPPGEPVKRIVTRRPYDDPGVERVYYRLVPEQETI 294
             HLYF  +  A     +F+L+RS TPPG+P+  I +RRP+DDP V RVYYR  P + TI
Sbjct: 266 AFHLYFESLTAADAPAAYFELVRSRTPPGKPIDLIASRRPFDDPQVSRVYYRFQPYRATI 325

Query: 295 VDKTHMPFALNKQRIANWKLWFIDADYEVAELPSYRPDIAANPMSAFIDLPVKARFKFLL 354
           VDKTH+P+ LN   + NW+ WFIDA Y+V+ LPSY+P +AANP  AFI LP  +R++F+L
Sbjct: 326 VDKTHIPYTLNNTVLQNWQKWFIDAKYQVSSLPSYKPSVAANPFEAFIQLPAGSRYRFML 385

Query: 355 DNAQNTVMAFIKGPVCRGQLALNVINDRFWVFFLDPEKADLPEVNEFYRSQVNNLKLPAE 414
             AQ+T+M FIKGPVCRGQ+ALNVINDRFWV+F+ PE  D  +  +FY+ Q+ NL++PAE
Sbjct: 386 TRAQDTIMGFIKGPVCRGQVALNVINDRFWVYFVTPEYMDDSDFTDFYQGQIENLRMPAE 445

Query: 415 QENTALPLSNWVRYSLQQSRYLEAKSEFINQWFKNGTHLTTDIIWDGAGINPNAALTIFR 474
           +E+TAL ++ WV+Y+ +Q  Y+ A+++F+N  FKNG HLT D +WDG G N NA+LT+FR
Sbjct: 446 EESTALAVT-WVKYAAKQGEYMRARNQFLNHKFKNGRHLTIDGLWDGNGNNDNASLTVFR 504

Query: 475 HFDSASVVQGLVGEPPKTAWIMDYALLERIHYLLVAGFDVYGNFGHQLITRMFMDFLRME 534
           HFD+A+VV+GLVGE PKTAW++DYALLERIHYLLVAGFDVYGN+GHQL+TR++MDFLRME
Sbjct: 505 HFDNATVVKGLVGESPKTAWVIDYALLERIHYLLVAGFDVYGNYGHQLLTRLYMDFLRME 564

Query: 535 GESNFVALLPRDMRHQELSSWYQNQSVQFSDFLQRNVKPFDQPTSVNYVTDNPKQELFAK 594
           GESNF+ LLP++ R ++   WYQ+   Q + F+  ++  F+QPT V Y TD+ K EL+ K
Sbjct: 565 GESNFLTLLPQEERRKQFKDWYQDAGTQLTAFIAGDINTFNQPTGVLYYTDDLKAELYQK 624

Query: 595 LRKQVQSVLSDRYVITQTGFKAEHEFALRQIDHLRGEGLLPIPQLMMLMIESE-QGKPQL 653
           L  +V  V   RY I  +  +   +  L+ +  ++G     +P+L M+MIE +  GK ++
Sbjct: 625 LAAKVGEVQPQRYQIALSQLQPNSKALLQALGRVKGTQATLLPELTMIMIEPQTPGKAEI 684

Query: 654 FTLIHNNAHTNISSLFDEQNNRDPKNDNLTLVRGVVGSYPSAYLTLKENQIPELYQRLAA 713
           FTL+ N+AH NISSLF+E++NR+P  D++TLVRG++GSYP A+  +KE  + ++  ++  
Sbjct: 685 FTLVRNSAHRNISSLFNEESNREPAKDDVTLVRGLLGSYPEAFWHIKEQDLAKVVAKVEG 744

Query: 714 MKSEQDYVALLDRFAVRRSSPEFWAFSDLVHQWYRQDQPIEFGLLDYNRFENR 766
           M++E+DY ALLD  AVRR+ P FWAFSD ++Q +    PIE G LDYNR +NR
Sbjct: 745 MQTEKDYEALLDLAAVRRTDPRFWAFSDKLNQAFFDSHPIESGWLDYNRLQNR 797