Pairwise Alignments

Query, 360 a.a., site-2 protease family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., peptidase M50 (RefSeq) from Shewanella loihica PV-4

 Score =  460 bits (1184), Expect = e-134
 Identities = 227/364 (62%), Positives = 278/364 (76%), Gaps = 6/364 (1%)

Query: 1   MELLCIDYLGKPLRLEGTMAGWQQLFWDNILVAQRPAQEQYEGDIQHHFQLTQGEHVLEC 60
           +ELL ID LGK LRLEG++AGWQQLFWDN LV+ + A  + +G   H F+L++ +   E 
Sbjct: 27  VELLRIDCLGKELRLEGSLAGWQQLFWDNQLVSVKEACAENQGLRNHEFELSRHDPQQET 86

Query: 61  C------LEIALTWQPFQLQYQTKLNGELVAQGMRSEKDVERQTPYEAPKVERRFSVIGL 114
                  LE+ L WQPF L Y+      ++++G R+ KD+ERQTP    K  ++ S++GL
Sbjct: 87  VQKIPLTLEVDLIWQPFTLNYRLLSEDAVLSEGSRNAKDIERQTPVTPVKAPQKLSLVGL 146

Query: 115 VSLAMKALKSAKMIKVVMASASLAAYSWLFSFQFALALIGCLVFHEYGHVRAMKYFGMKT 174
            SL  K LKSAK+IKVV+A AS+AAYSWLFSFQFALALI CL+FHEYGH+RAMKYFGMKT
Sbjct: 147 ASLGFKLLKSAKVIKVVLAGASVAAYSWLFSFQFALALIACLMFHEYGHIRAMKYFGMKT 206

Query: 175 KGIYLVPFLGGLALSDEKINTRWQDVVISIMGPCFGFLLSLLLVGVYWVTDSPFWAALAV 234
           KGIYL+PF+GGLALSDEKINTRWQDVVISIMGP FG L+S+  +  YW+TD+P +A LA 
Sbjct: 207 KGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLLMSIAALVAYWITDNPLFAGLAA 266

Query: 235 FNAFLNLFNLLPVLPLDGGHILKSVSFSMNSKMGVILCVLAILGGIALSYSLGLTLFGFL 294
           FNA LNLFNLLP+LPLDGGHILKS+SFSMNS MG++ CV     G+ +SYSLGL L GFL
Sbjct: 267 FNALLNLFNLLPILPLDGGHILKSISFSMNSLMGLVACVAGAAIGVFISYSLGLALLGFL 326

Query: 295 LLMGALDIVFEWRQRHHSHLLPLNRYAQMVSTIWYFALVSGLIAIIIGFASTGDTLLSLP 354
           LL+G+L+IVFEW+ RH SHLLPL+RY Q+ STIWY   V  L+AII   A +GD +L LP
Sbjct: 327 LLIGSLEIVFEWKSRHQSHLLPLDRYGQIFSTIWYLLTVGALVAIIWYLAGSGDNMLGLP 386

Query: 355 LLIL 358
           L IL
Sbjct: 387 LKIL 390