Pairwise Alignments

Query, 318 a.a., DUF475 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., Integral membrane protein TerC (NCBI) from Rhodospirillum rubrum S1H

 Score =  168 bits (426), Expect = 1e-46
 Identities = 111/337 (32%), Positives = 165/337 (48%), Gaps = 46/337 (13%)

Query: 5   TYLGFGLLTLTLVAVDLWQTRGGN-VTIKKAAIWSIAWFLLAFVFAISLYYGWQWYAPHS 63
           T +GF       V +DL+  R    ++++ A++WS  W  LA  F     + + W     
Sbjct: 16  TVIGFS------VFIDLFAHRHAKEISVRDASLWSCFWIGLALAF-----FAYLWLRFDK 64

Query: 64  SYSAEKATLSFITGYLLEKSLSVDNLFVFAIIFHQYSVPEHLRPRALLWGVIGALVLRAI 123
           +++       ++ GY LEKSLS+DNL VF  IF  + +   L+ R L WG+IGALV RAI
Sbjct: 65  TWAD-----LYLAGYALEKSLSIDNLIVFMAIFASFGIKGVLQHRILYWGIIGALVFRAI 119

Query: 124 MIAVGAQLLSQYHWILYVFALFLIWTGIQLARDKGE-ESINPLPERW------------- 169
            +AVG  L +   W+ ++FA  + W+G ++    G+ E I    E W             
Sbjct: 120 FVAVGTGLFALAPWVGFIFAAIVAWSGWKMLTSGGDNEEITDYSEHWSVKITARLMPVFP 179

Query: 170 --------IRRCFNVTKEYQGNALICKQQGQWWVTPMFIVIGVIAFMDVMFALDSIPAIF 221
                   + R            L   +    + TP F+ +  I   DVMFA DS+PA+ 
Sbjct: 180 RLYAERFFVNRAIVADLAKSDPTLKLAKNAAVFATPAFLCLMAIETSDVMFAFDSVPAVI 239

Query: 222 AMTQEPFLVLAANVFALLGLRSLYFVLQGMMDKFFYLKPALAFIMMFIGVKMMLVDS--- 278
           A+TQEP LV AA +FA+LGLRSLYFVL  M     +L+ A+  ++ FI  K+ L      
Sbjct: 240 AVTQEPLLVYAAMIFAVLGLRSLYFVLAAMTKYLVHLEKAVIVLLFFIAAKLTLQSGEHV 299

Query: 279 -AW---AIPTPISLCVLLVTMSTAVIASVLRERSQSK 311
             W    I   +SL ++L T++  VIAS +    + K
Sbjct: 300 FGWDFLHISPNVSLLIVLGTLAAGVIASFIWPAKEEK 336