Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator PA5437 from Pseudomonas fluorescens FW300-N2E2

 Score =  107 bits (266), Expect = 5e-28
 Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 2/281 (0%)

Query: 4   SLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALTHWG 63
           +L+QL +F+ V D  S S+AAD+++LTQ A S+ +  LE+++G+PLFE  GK++ +T   
Sbjct: 2   TLRQLQIFNEVCDLRSYSRAADEMSLTQPAVSLQIRSLEELIGQPLFEYVGKKLYMTEAA 61

Query: 64  MWLRPKAKRLLQDAQQIEMGFYD-QHLLSGEIRLGASQTPAEHLVPDLISIIDSDFPEIR 122
             L+  ++ +    + ++M   D Q  L G+++L A ++ A++ VP L +      PE+ 
Sbjct: 62  EALQRASRDIFGRLENLDMQLSDMQGSLQGQLKL-AVESSAKYFVPHLFAAFKRQHPEVN 120

Query: 123 ISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKRESV 182
           ++L V +   VI  + D + DL I+     D  +    +  + +  VA   HP      +
Sbjct: 121 LNLTVVNRGQVIRRLSDNRDDLVIMSMVPQDMGLEFLPFLNNPIVAVAPPDHPLCHMGPL 180

Query: 183 SLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLTCLP 242
            L  LE    +LRE G+GTR   +              E       R  V  G  +  L 
Sbjct: 181 RLQDLEPYTLLLREPGSGTRLACEEYFKEKRVHFTQTLEVASAEAQRECVVAGLGVALLT 240

Query: 243 YLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLA 283
              V R + SG L+ L V EL + R+   +       +P+A
Sbjct: 241 RHAVSRELSSGALIELPVEELPLYRSWCLVQARAKRLSPVA 281