Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., LysR family transcriptional regulator PA3398 from Pseudomonas fluorescens FW300-N2E2

 Score =  169 bits (428), Expect = 8e-47
 Identities = 100/278 (35%), Positives = 152/278 (54%), Gaps = 11/278 (3%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           MR++L+QL VF AVA   SVS+AA +L L+QSA S S+ +LE+     LF+R GK+++L 
Sbjct: 21  MRFTLRQLQVFVAVAQQESVSRAAGQLNLSQSAASTSITELERQSSCQLFDRAGKRLSLN 80

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYDQHLLSGE-----IRLGASQTPAEHLVPDLISIID 115
             G  L P+A  LL  A++IE       LL+G+     + +GA+ T   +L   LI    
Sbjct: 81  ALGKQLLPQAVALLDQAKEIE------DLLNGKSGFGSLAVGATLTIGNYLATLLIGGFM 134

Query: 116 SDFPEIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHP 175
              PE ++ L V++T  ++  V  Y+ DLG+IEG C    I  + W  D L +  +  HP
Sbjct: 135 QRHPESQVKLHVQNTANIVHQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHP 194

Query: 176 FAKRESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANG 235
            AKR   ++ +L    W+LREQG+GTR  FD  +      L++  E EH   ++  V +G
Sbjct: 195 LAKRGQATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESG 254

Query: 236 PYLTCLPYLDVERFIESGLLVALNVPELNMERTLSFIW 273
             + C+  L +      G LVA+  P++++ R   FIW
Sbjct: 255 LGIGCISRLALRDAFRRGSLVAVETPDMDLARQFYFIW 292