Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  102 bits (253), Expect = 2e-26
 Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 2/285 (0%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           MR +L+QL VF AV +  S S+AA+++ALTQ A S+ + QLE+++G+PLFE  GK++ LT
Sbjct: 6   MRMTLRQLQVFRAVCETLSYSRAAEEMALTQPAVSLQIRQLEELVGQPLFEYVGKKLYLT 65

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYD-QHLLSGEIRLGASQTPAEHLVPDLISIIDSDFP 119
                L+  +  +      ++M   D Q  L G++ L A ++ A+++ P L +      P
Sbjct: 66  DAADALQRASTDIFGRLDSLDMQLSDLQGSLQGQLNL-AVESSAKYVTPHLFAAFKRLHP 124

Query: 120 EIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKR 179
           E+ + L V +    ++ +   + DL I+     D  +    +  + +  VA   HP    
Sbjct: 125 EVSLQLVVVNHAQAVKRLSVSRDDLLIMSQVPTDMDLEFMPFLNNPIIAVAPPGHPLCHA 184

Query: 180 ESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLT 239
            ++SL  L     ++RE G+GTR   +  +           +   +  LR  V  G  L 
Sbjct: 185 ATLSLQDLTGYPLLVREPGSGTRRAGEDYLRQKRAHFAQTIQVASLDALRECVVAGLGLA 244

Query: 240 CLPYLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLAE 284
            LP   V   + SGLL  L V EL + R+   +       +P+A+
Sbjct: 245 LLPRHAVHLELASGLLRELPVAELPLYRSWCVVHPRSKRLSPVAQ 289