Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  110 bits (276), Expect = 3e-29
 Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 2/284 (0%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           MR +L+QL +F+ V D  S S+AA++++LTQ A S+ + QLE+++G+PLFE   K++ LT
Sbjct: 6   MRMTLRQLRIFNEVCDLRSYSRAAEEMSLTQPAVSLQIRQLEELIGQPLFEYVSKKLYLT 65

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYD-QHLLSGEIRLGASQTPAEHLVPDLISIIDSDFP 119
                L+  ++ +    + ++M   D Q  L G+++L A ++  ++ +P L +      P
Sbjct: 66  EAAQALQQASRDIFGRLESLDMQLSDMQGSLQGQLKL-AVESSCKYFIPHLFAAFKRQHP 124

Query: 120 EIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKR 179
           E+ +SL V +   VI  + D + DL ++     D  +    +  + +  VA   HP + R
Sbjct: 125 EVSLSLMVVNRAQVIRRLADNRDDLVVMSAVPLDMGLEFLPFLNNPIVAVAPPDHPLSSR 184

Query: 180 ESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLT 239
            +++L  LE    + RE G+GTR   +              E       R  V  G  L 
Sbjct: 185 ATLNLKDLEPWPLLTRETGSGTRRACEEFFKEKRVHFTQTLEVSSSEAQRECVVAGLGLA 244

Query: 240 CLPYLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLA 283
            L    V + + +G LV L V EL + R+       D   +P+A
Sbjct: 245 MLTRHAVCQELATGALVELPVAELPLYRSWCVAQAGDKRLSPVA 288