Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., regulatory protein, LysR:LysR, substrate-binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  158 bits (399), Expect = 2e-43
 Identities = 91/259 (35%), Positives = 146/259 (56%), Gaps = 1/259 (0%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           M+ SL+QL +F AVA  GS + AA  ++L+QSATS +L +LE  L   LF+R GK++ L 
Sbjct: 1   MKLSLRQLQIFCAVAQHGSTTSAAISVSLSQSATSAALNELESALDTRLFDRVGKRLVLN 60

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYDQHL-LSGEIRLGASQTPAEHLVPDLISIIDSDFP 119
             G  L P+A+R+L++AQQIE  F   H  L   +R+G S T   +++P ++  +    P
Sbjct: 61  DNGHALLPQARRMLENAQQIEASFLPGHAGLKTRLRVGCSTTIGNYVLPLILGELRQSTP 120

Query: 120 EIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKR 179
            +R+ + + ++  +   V D++ D+G+IEG C    +  E W  D L I A   HP A +
Sbjct: 121 HLRVDVDMANSMAIARRVADFEIDMGLIEGPCHLPELSAEPWLIDELLIAAGQRHPLALK 180

Query: 180 ESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLT 239
           + V+L  L  A+W+LRE G+GTR   + ++   + DL   R+      ++  +A G  ++
Sbjct: 181 QQVTLDDLRTAEWLLREPGSGTREEVEQLLLRHLHDLAETRQIGSSEAIKHTLAQGIGIS 240

Query: 240 CLPYLDVERFIESGLLVAL 258
           CL    V   + S +LV L
Sbjct: 241 CLSRWVVRDLLASEVLVEL 259