Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  170 bits (431), Expect = 3e-47
 Identities = 105/278 (37%), Positives = 153/278 (55%), Gaps = 11/278 (3%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           MR++L+QL VF AVA   SVS+AA  L+L+QSA S S+ +LE+     LF+R GK+++L 
Sbjct: 1   MRFTLRQLQVFVAVARQESVSKAAVLLSLSQSAASTSITELERQSSCQLFDRAGKRLSLN 60

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYDQHLLSGE-----IRLGASQTPAEHLVPDLISIID 115
             G  L P+A  LL  A++IE       LL+G+     + +GA+ T   +L   LI    
Sbjct: 61  ATGRQLLPQAVALLDQAKEIE------DLLNGKSGFGSLAVGATLTIGNYLATLLIGGYM 114

Query: 116 SDFPEIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHP 175
              PE ++ L V++T  +++ V  Y+ DLG+IEG C    I  + W  D L +  +  HP
Sbjct: 115 QRHPESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHP 174

Query: 176 FAKRESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANG 235
            AKR  V+L +L    W+LREQG+GTR  FD  +      L+V  E EH   ++  V +G
Sbjct: 175 LAKRAQVTLEELTHEAWILREQGSGTRLTFDQAMRHHRNGLNVRLELEHTEAIKRAVESG 234

Query: 236 PYLTCLPYLDVERFIESGLLVALNVPELNMERTLSFIW 273
             + C+  L +      G LV L  PEL++ R   FIW
Sbjct: 235 LGIGCISRLALRDAFRRGNLVELATPELDLARQFYFIW 272