Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transcriptional regulator, LysR family from Synechococcus elongatus PCC 7942

 Score =  105 bits (262), Expect = 1e-27
 Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 7/294 (2%)

Query: 3   YSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALTHW 62
           ++L QL +  A+A  GS  +AAD L ++Q A S+ +  LE+ L  PLF+R G++  LT  
Sbjct: 6   FTLDQLRILRAIAAEGSFKRAADSLYVSQPAVSLQVQNLERQLNVPLFDRGGRRAQLTEA 65

Query: 63  GMWLRPKAKRLLQDAQQIEMGFYD-QHLLSGEIRLGASQTPAEHLVPDLISIIDSDFPEI 121
           G  L    +R+L    +      D Q+L  G + +GASQT   +L+P +I      +P++
Sbjct: 66  GHLLLSYGERILSLCAETCRAIEDLQNLQGGTLIIGASQTTGTYLLPRMIGRFRQRYPDV 125

Query: 122 RISLGVKSTKGVIEGVLDYKYDLGIIEGRCD---DNRIYQEVWCRDHLTIVASAHHPFAK 178
            + L V ST+     V + + DL II G       + +    +  D L ++    HP  +
Sbjct: 126 AVQLHVHSTRRTSWSVANGQIDLAIIGGEVPTELQDSLVTIPYAEDELALILPVSHPLTQ 185

Query: 179 RESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPL---IPDLDVWREYEHVPVLRTLVANG 235
           + S+    L + +++  +  +  R + D V+         L +  E   +  ++  V  G
Sbjct: 186 QASIQREDLYKLQFIALDSQSTIRKVIDQVLSRSGIETRRLRIEMELNSIEAIKNAVQAG 245

Query: 236 PYLTCLPYLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLAECIKRE 289
                +    +E+ +E G L      +L ++RTLS I+  +   +  A    +E
Sbjct: 246 LGAAFVSVSAIEKELEMGSLHRAQTNDLCVQRTLSVIYNPNRYRSKAAVAFSQE 299