Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., ndhF3 operon transcriptional regulator from Synechococcus elongatus PCC 7942

 Score =  114 bits (284), Expect = 4e-30
 Identities = 76/241 (31%), Positives = 128/241 (53%), Gaps = 2/241 (0%)

Query: 4   SLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALTHWG 63
           +L QL VF+A A   S ++AA++L LTQ   S+ + QL K +G PLFE+ GK++ LT  G
Sbjct: 5   TLHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYLTEAG 64

Query: 64  MWLRPKAKRLLQDAQQIEMGFYD-QHLLSGEIRLGASQTPAEHLVPDLISIIDSDFPEIR 122
             L    +++ +  +Q++M   D Q +  G++RL A  T A++ +P LI      +P I 
Sbjct: 65  RQLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRL-AVITTAKYFIPRLIGPFCQRYPGIN 123

Query: 123 ISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKRESV 182
           +SL V + +G+I  + D   DL ++        I  + +  + L +V  A HP A +  +
Sbjct: 124 VSLKVTNHEGLINRINDNLDDLYVLSRPPSGFDITVQPFLDNPLVVVGPASHPLANQRGI 183

Query: 183 SLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLTCLP 242
           SL +L Q  ++LRE+G+GTR   + +      +L+V  +      ++  +  G  L  L 
Sbjct: 184 SLERLAQEPFILRERGSGTREATEQLFAAHNLNLNVKLDLGSNEAIKQAILGGLGLAVLS 243

Query: 243 Y 243
           Y
Sbjct: 244 Y 244