Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  395 bits (1014), Expect = e-115
 Identities = 188/295 (63%), Positives = 238/295 (80%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           M+YSLKQ+ VFDAVA   SVS AA KL++TQSA SMSL QLE +LGRPLF RQG ++ L+
Sbjct: 1   MKYSLKQIMVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLS 60

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYDQHLLSGEIRLGASQTPAEHLVPDLISIIDSDFPE 120
           HWG WLRP+A+RLLQDAQQIE+G ++QHL+SG  RL +SQT AEHL+P+LIS ID+DFPE
Sbjct: 61  HWGNWLRPRARRLLQDAQQIELGLHEQHLISGRFRLCSSQTAAEHLLPELISKIDTDFPE 120

Query: 121 IRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKRE 180
           +RI L V++T+ V+EG+L+Y+YD GIIEGR DD+R+YQE W  DHL +VAS HHP+AK+ 
Sbjct: 121 LRIELTVENTENVVEGLLNYEYDFGIIEGRNDDSRLYQEQWLDDHLVVVASPHHPYAKQT 180

Query: 181 SVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLTC 240
           ++SLAQLEQA+WVLREQGAGTR IF+  IH +I  L VW+EYEHV +L+ LV NGPYL+ 
Sbjct: 181 NISLAQLEQARWVLREQGAGTRRIFEGAIHGVIEKLHVWKEYEHVSLLKALVKNGPYLSS 240

Query: 241 LPYLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLAECIKREGLRMMK 295
           LP+LDVE+ + +G LV L  P+LNM+R LSF+WR D  ENPL +C+  E  R+ K
Sbjct: 241 LPFLDVEKEVAAGELVILPTPQLNMQRHLSFVWRCDSGENPLRDCVITEARRLSK 295