Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  103 bits (257), Expect = 5e-27
 Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 7/296 (2%)

Query: 4   SLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALTHWG 63
           +L+Q+ +  AV D GSVS AA+ L LTQ   SM L +L  ++G PL+   G+++  T  G
Sbjct: 11  TLRQMEILLAVYDSGSVSGAAETLHLTQPTISMQLKKLADVIGFPLYNIVGRKVVFTEAG 70

Query: 64  MWLRPKAKRLLQDAQQIEMGFYDQ-HLLSGEIRLGASQTPAEHLVPDLISIIDSDFPEIR 122
           + +   A  +L    ++EM   D   L SG +RL A  T +++ +P L+      +P + 
Sbjct: 71  LEVVKSATEILDSFARLEMSLSDMGELKSGTLRL-AVVTTSKYFIPHLLGPFCERYPNVA 129

Query: 123 ISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKRESV 182
           + L V + + +IE +     D  +      D       +  + L  +A  +HP   ++ V
Sbjct: 130 VQLNVGNRQQIIERLKQGIDDFYVFSHPPADLNTDSIEFFNNPLVAIAQENHPLVSQDGV 189

Query: 183 SLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLTCLP 242
           SLA+L  A +++RE G+GTR   +  +      L+V    E    ++  V +G  ++ L 
Sbjct: 190 SLAELCDAPFLMRENGSGTRLAIERFMAKQGVKLNVKMTIESNEAIKHSVMSGLGVSILS 249

Query: 243 YLDVERFIESGLLVALNVPELNMERTLSFIWRADMEENPLAEC----IKREGLRMM 294
              +     +G L  LNV EL +     F+W      + +A+     ++ EG  M+
Sbjct: 250 AHTLAFGGNTG-LAQLNVKELPINSNWYFLWLKSKRPSAIAQAFLTHVESEGREML 304