Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  141 bits (356), Expect = 2e-38
 Identities = 91/268 (33%), Positives = 141/268 (52%), Gaps = 2/268 (0%)

Query: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60
           MR +L+QLAVF+AVA  G V++AA+++ L+  ATSM+LA+LEK L   LFER G ++ L 
Sbjct: 1   MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLN 60

Query: 61  HWGMWLRPKAKRLLQDAQQIEMGFYDQH-LLSGEIRLGASQTPAEHLVPDLISIIDSDFP 119
             G  L P A  LL   +QIE  F  Q   L G + + AS T   +L+            
Sbjct: 61  SQGNLLLPLATDLLHRVEQIEQAFTRQDGDLVGHLSVSASSTIGNYLLAKAAVAFCQQHT 120

Query: 120 EIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPFAKR 179
           +  + + + +T+ VI+ V  ++ ++G IEG C DNR+  E W +D L +     HP A  
Sbjct: 121 QTHVDVAITNTQEVIQSVAQFRAEMGFIEGHCTDNRLNIEPWHKDRLLVFCHPAHPLA-G 179

Query: 180 ESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGPYLT 239
           ++V  A ++   WVLRE+G+GTR  F +  + L    +    +     ++  V  G  L 
Sbjct: 180 QTVKPAAVKGQSWVLREEGSGTREYFVNAANELGMQPEAKFCFTTPDAIKLAVKQGAGLG 239

Query: 240 CLPYLDVERFIESGLLVALNVPELNMER 267
            L  L +++ I    L  + +  L +ER
Sbjct: 240 VLSELALDKDISRKELALVTIEGLVLER 267