Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Formate/nitrite family of transporters from Pseudomonas stutzeri RCH2

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 38/288 (13%)

Query: 14  PTEMMAEAEKFALSKAKKTSGMILGLSVMAGAFIGLAFLFYITVTTGSASAGWGLSRLAG 73
           P+E + +      SK   ++   L  + MAGA + LA +F + VT  + S       L G
Sbjct: 6   PSEFVTKMVDAGESKIFMSTRDTLIRAFMAGAILSLAAVFAVAVTVQTGSP------LVG 59

Query: 74  GVAFSMGLILIVICGGELFTSS-VLSSISWANRE--ISFGKMLSIWGKVYVGNFIGAI-- 128
            + F +G I++ + G +L T   +L+ ++  +R   ++   +L  WG V++GNF GA+  
Sbjct: 60  AMLFPVGFIMLYLMGFDLLTGVFMLTPLALLDRRPGVTVNGILRNWGWVFLGNFAGALVV 119

Query: 129 -FLLLLVTAAGLYQLDEGQWGLNALNIAQHK-LHHTTVQA------FALGILCNLLVCLA 180
            F++  V   G +  + G  G    +I + + L +    A      F  G+LCN +V + 
Sbjct: 120 AFMMAFVFTMG-FSTEPGPIGEKISHIGESRTLGYAEFGAAGWATIFLRGMLCNWMVSMG 178

Query: 181 IWLTFSSANAMTKAAMTIMPVAMFVSSGFEHCVANMFMVPLGIVIQNFAPDSFWQQVGVT 240
           +     S +   K     MP+ +F   GFEH V NMF+ P  +++               
Sbjct: 179 VVGAMISTSVSGKVIAMWMPIMLFFFMGFEHSVVNMFLFPSAMIMG-------------- 224

Query: 241 ASQYSDLNVTQFITANLIPVTLGNIVGGAVLVGLANWSIYRRPQLKAA 288
                D +V  ++  N IP  LGN+VGG    GL  ++ + R   K A
Sbjct: 225 ----GDFSVMDYMVWNEIPTALGNLVGGLAFTGLTLYTTHVRTAPKRA 268