Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., formate transporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  308 bits (788), Expect = 4e-88
 Identities = 182/511 (35%), Positives = 274/511 (53%), Gaps = 60/511 (11%)

Query: 17  MMAEAEKFALSKAKKTSGMILGLSVMAGAFIGLAFLFYITVTTGSASAGWGLSRLAGGVA 76
           +MA+    +  K  K        +V AG FIGL F+FY+TVTTGSA A WG+ RLAG +A
Sbjct: 31  LMADICYASRKKLAKGQRQRFAEAVYAGIFIGLGFVFYLTVTTGSAGAPWGMVRLAGALA 90

Query: 77  FSMGLILIVICGGELFTSSVLSSISWANREISFGKMLSIWGKVYVGNFIGAIFLLLLVTA 136
           FS+GL+L+V+ G ELFT +VL++I WA        +L  W  VY GN +GA+ L  LV  
Sbjct: 91  FSLGLMLVVLLGMELFTGTVLTAIPWAQGSARLSTLLKSWLCVYCGNALGALSLAALVLL 150

Query: 137 AGLYQLDEGQWGLNALNIAQHKLHHTTVQAFALGILCNLLVCLAIWLTFSSANAMTKAAM 196
           AG++QLD G WG+N ++ A HKLHH   +AF LG+LCN LVCL +WL+F S N  T+A +
Sbjct: 151 AGVWQLDGGLWGVNLISTALHKLHHGWWEAFFLGVLCNFLVCLGVWLSFLSTNPGTRALL 210

Query: 197 TIMPVAMFVSSGFEHCVANMFMVPLGIVIQNFAPDSFWQQVGVTASQYSDLNVTQFITAN 256
            ++PVA+FVSSGFEH +AN+F++PL  ++    PD+F    G+  ++ ++L     +  N
Sbjct: 211 LMLPVALFVSSGFEHSIANLFLLPLAGMLAQHIPDTFLLTHGIEPARLAELTPANMLQLN 270

Query: 257 LIPVTLGNIVGGAVLVGLANWSIYRRPQLKAANV----------VTITETQA-------- 298
           L+PVTLGNIVGGAVLVG+    ++R  +  A  V          +++  T+A        
Sbjct: 271 LLPVTLGNIVGGAVLVGMGLLGVHRLGERSAQAVSAAPANFGAGLSLVTTEAHLPVGEGA 330

Query: 299 --------------------------LTSVKETLMKSTIT----VKDMMNSQPVTLSVDM 328
                                     LT + + L  +  +     + MMN    TL+V  
Sbjct: 331 PTDRRYFTQASRFANTHFTPTPSSPCLTPLPDALHPAAASPLSLEQTMMNKHLTTLTVAA 390

Query: 329 TTPAAIDTLLDHHL------------SAAPVVDMQGRLVGVLSSHDVMVDLWCQDYLPSQ 376
               A+    D +L             + PVV   GRLVG+L+  D M  LW +++  + 
Sbjct: 391 LLEPAVTLTPDMNLWQSLALMESADGVSCPVVADGGRLVGMLAPQDAMRGLWAEEFAANG 450

Query: 377 DQKVVDLMTRDVIAIDVNDKLVDVAEFFCIDKEQLFPTTSMGIATRFSALSLEERAKSMK 436
             +V D+M + +  +  ++ L+ V E++ +D+++LFP T  G        + EER +   
Sbjct: 451 SYRVGDMMQKVLHTVAADEPLLTVLEYWVVDRQRLFPVTGEGHWLGTGYQAYEERLRGAV 510

Query: 437 VNKPHMLPVLHNGQLVGVLERNDVLEALRPI 467
              P  LPV+  G L G++ R+ +L  L+ +
Sbjct: 511 AASPATLPVVEAGVLKGIIHRDALLRLLQSV 541