Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., CBS domain-containing protein from Rhodopseudomonas palustris CGA009

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 54/173 (31%)

Query: 315 DMMNSQPVTLSVDMTTPAAIDTLLDHHLSAAPVVDMQGRLVGVLSSHDVMV--------- 365
           D+M +  VT+  +    A  +TLL H +SA PVVD  G  +G++S  D+M          
Sbjct: 5   DVMTTAIVTVQPETPVHAIAETLLKHGISAVPVVDGAGVPLGIVSEGDLMPRADSDREAR 64

Query: 366 -DLWCQ----------DY---LPSQDQKVVDLMTRDVIAIDVNDKLVDVAEFFCIDKEQL 411
            D W Q          DY   L S  +   D+M   V+ ++    L D+A+         
Sbjct: 65  HDWWLQMLSEGEAVHPDYVRFLKSDTRTAKDVMVGPVVTVEETTALADIAD--------- 115

Query: 412 FPTTSMGIATRFSALSLEERAKSMKVNKPHMLPVLHNGQLVGVLERNDVLEAL 464
                         L +E+R K         +PV+  G +VG++ R D+L+ +
Sbjct: 116 --------------LLVEKRIK--------RVPVVRAGHIVGIVSRADLLKTM 146



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 306 LMKSTITVKDMMNSQPVTLSVDMTTPAAIDTLLDHHLSAAPVVDMQGRLVGVLSSHDVM 364
           L   T T KD+M    VT+          D L++  +   PVV   G +VG++S  D++
Sbjct: 86  LKSDTRTAKDVMVGPVVTVEETTALADIADLLVEKRIKRVPVV-RAGHIVGIVSRADLL 143