Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., inner membrane protein YfdC from Phaeobacter inhibens DSM 17395

 Score = 53.5 bits (127), Expect = 9e-12
 Identities = 49/236 (20%), Positives = 97/236 (41%), Gaps = 33/236 (13%)

Query: 41  VMAGAFIGLAFLFYITVTTGSASAGWGLSRLAGGVAFSMGLILIVICGGELFTSSVLSSI 100
           + AG  I  + L      T    A W  S L   + +S+G +++++   +LFT + ++++
Sbjct: 56  IAAGLLISFSVLGKAVFKTHLPDASW--SPLVENLGYSLGFLMVILGRMQLFTENTITTV 113

Query: 101 -----SWANREISFGKMLSIWGKVYVGNFIGAIFLLLLVTAAGLYQLDEGQWGLNALNIA 155
                 W   + SF +   +WG V   N +GA    L+ +   L  + +       + I+
Sbjct: 114 VPVMLRWD--KASFLRTARLWGVVLAANVVGAF---LIASFFALTPVLDADLRAAMVKIS 168

Query: 156 QHKLHHTTVQAFALGILCNLLVCLAIWLTFSSANAMTKAAMTIMPVAMFVSSGFEHCVAN 215
           +H      +     GI   +L+   +W+  S+ ++  +  + I+   +  +  F H VA 
Sbjct: 169 EHATGMPPLIGLISGIPSGILIAAIVWMLPSTQHS--EIPLIIIFTWLIAAGDFTHIVAG 226

Query: 216 MFMVPLGIVIQNFAPDSFWQQVGVTASQYSDLNVTQFITANLIPVTLGNIVGGAVL 271
              +   +++Q   P   WQ                 I    IPV +GN++GG  +
Sbjct: 227 SVEMAF-LMVQGLLP--LWQA----------------IFGFFIPVLIGNVIGGTAV 263