Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 150 a.a., CBS domain containing membrane protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 22/161 (13%)

Query: 311 ITVKDMMNSQPVTLSVDMTTPAAIDTLLDHHLSAAPVVDMQGRLVGVLSSHDVMVDLWCQ 370
           +  KD+M + PVT++ +     A   ++    +  PVVD +G LVGV+          CQ
Sbjct: 2   LLAKDIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDGKGTLVGVI----------CQ 51

Query: 371 DYLPSQDQKVVDLMTRDVIAIDVNDKLVDVAEFFCIDKE-QLFPTTSMGIA------TRF 423
             L +Q +K ++L T       V D  + +     +D+E +    T++G A      T  
Sbjct: 52  SDLIAQHKK-LNLPT----LFTVLDGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVG 106

Query: 424 SALSLEERAKSMKVNKPHMLPVLHNGQLVGVLERNDVLEAL 464
               ++E A  M  +K H LPV+  G LVGV+ + DVL  L
Sbjct: 107 PETPIDEVASLMVDSKYHTLPVVDAGSLVGVIGKEDVLRTL 147



 Score = 32.3 bits (72), Expect = 1e-05
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 8/105 (7%)

Query: 267 GGAVLVGLANWS--IYRRPQLKAANVVTITE----TQALTSVKETLMKSTIT-VKDMMNS 319
           G   LVG+   S  I +  +L    + T+ +     ++++ + E + K + T V   M  
Sbjct: 41  GKGTLVGVICQSDLIAQHKKLNLPTLFTVLDGFIPLRSMSDLDEEMRKISATNVGQAMTP 100

Query: 320 QPVTLSVDMTTPAAIDTLLDHHLSAAPVVDMQGRLVGVLSSHDVM 364
            PVT+  +         ++D      PVVD  G LVGV+   DV+
Sbjct: 101 DPVTVGPETPIDEVASLMVDSKYHTLPVVD-AGSLVGVIGKEDVL 144