Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., formate transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  341 bits (874), Expect = 2e-98
 Identities = 160/260 (61%), Positives = 203/260 (78%)

Query: 20  EAEKFALSKAKKTSGMILGLSVMAGAFIGLAFLFYITVTTGSASAGWGLSRLAGGVAFSM 79
           +AE +  SK  K      GL+V AGAFI LAF+FY+TVTTG+  + WGL RL GG+AFS+
Sbjct: 30  QAEIYGKSKVVKAPWQSFGLAVFAGAFIALAFVFYLTVTTGAGDSAWGLVRLVGGIAFSL 89

Query: 80  GLILIVICGGELFTSSVLSSISWANREISFGKMLSIWGKVYVGNFIGAIFLLLLVTAAGL 139
           GLIL+VICGGELFTSSVLSS++WA ++++  ++L  W +VY+GNF+GA+ ++ L+ AAGL
Sbjct: 90  GLILVVICGGELFTSSVLSSVAWAQKQVTTSELLKCWTRVYLGNFVGAMLMVGLIMAAGL 149

Query: 140 YQLDEGQWGLNALNIAQHKLHHTTVQAFALGILCNLLVCLAIWLTFSSANAMTKAAMTIM 199
           Y+LD G WGLNAL +AQHKLHHT +QAF+LGILCN+LVCL IW+TF+S  ++TKA + I+
Sbjct: 150 YELDGGNWGLNALKVAQHKLHHTWIQAFSLGILCNMLVCLGIWMTFASRESLTKAILLIL 209

Query: 200 PVAMFVSSGFEHCVANMFMVPLGIVIQNFAPDSFWQQVGVTASQYSDLNVTQFITANLIP 259
           PVAMFVSSGFEH +AN+FMVP GI IQ  A   F+  +GVT  Q++DL V  FI  NLIP
Sbjct: 210 PVAMFVSSGFEHSIANLFMVPFGITIQAVASPEFFASLGVTQEQFADLTVANFIFKNLIP 269

Query: 260 VTLGNIVGGAVLVGLANWSI 279
           VTLGNIVGG V+VGL  W I
Sbjct: 270 VTLGNIVGGGVIVGLGYWWI 289