Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 138 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.3 bits (155), Expect = 2e-15
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 31/155 (20%)

Query: 310 TITVKDMMNSQPVTLSVDMTTPAAIDTLLDHHLSAAPVVDMQGRLVGVLSSHDVMVDLWC 369
           +I ++D M+ QPV L  +M+   A++ LLD++   A VVD  G LVG LS  D +  +  
Sbjct: 3   SIKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDSGNLVGFLSQQDCLAVMLK 62

Query: 370 QDYLPSQDQKVVDLMTRDVIAIDVNDKLVDVAEFFCIDKEQLFPTTSMGIATRFSALSLE 429
             Y       V D M  +V+ +  ++ ++ +AE                           
Sbjct: 63  SSYHCDLTSVVKDCMRTEVLYVGPDESILQLAE--------------------------- 95

Query: 430 ERAKSMKVNKPHMLPVLHNGQLVGVLERNDVLEAL 464
                M   KP + PV+ NG+++G + R +VL A+
Sbjct: 96  ----QMLGAKPKIYPVVDNGKVIGTINRTNVLRAM 126