Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 150 a.a., CBS domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 28/164 (17%)

Query: 311 ITVKDMMNSQPVTLSVDMTTPAAIDTLLDHHLSAAPVVDMQGRLVGVLSSHDVMVD---- 366
           +  +D+M + PVT++ D     A   L++   +  PVVD  GRLVGV+   D++      
Sbjct: 2   LKARDIMTASPVTVAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDLITQHKKL 61

Query: 367 ------LWCQDYLPSQDQKVVDLMTRDVIAIDVNDKLVDVAEFFCIDKEQLFPTTSMGIA 420
                      ++P      +D   R + A  V   +         D   + P T     
Sbjct: 62  NIPSFFTVLDGFIPLTSMSELDEQMRRISATIVKHAMT-------ADPVTVTPET----- 109

Query: 421 TRFSALSLEERAKSMKVNKPHMLPVLHNGQLVGVLERNDVLEAL 464
                 +++E A  M  +K H LPV+ NG+LVGV+ + D+L  L
Sbjct: 110 ------AIDEIASLMVDSKLHTLPVVENGKLVGVIGKEDLLRTL 147



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 309 STITVKDMMNSQPVTLSVDMTTPAAIDTLLDHHLSAAPVVDMQGRLVGVLSSHDVM 364
           S   VK  M + PVT++ +         ++D  L   PVV+  G+LVGV+   D++
Sbjct: 90  SATIVKHAMTADPVTVTPETAIDEIASLMVDSKLHTLPVVE-NGKLVGVIGKEDLL 144