Pairwise Alignments

Query, 483 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

Subject, 138 a.a., signal transduction protein (RefSeq) from Shewanella sp. ANA-3

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 31/155 (20%)

Query: 310 TITVKDMMNSQPVTLSVDMTTPAAIDTLLDHHLSAAPVVDMQGRLVGVLSSHDVMVDLWC 369
           +I ++D M+ QPV L  +M+   A++ LLD++   A VVD  G LVG LS  D +  +  
Sbjct: 3   SIKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDNGDLVGFLSQQDCLAVMLK 62

Query: 370 QDYLPSQDQKVVDLMTRDVIAIDVNDKLVDVAEFFCIDKEQLFPTTSMGIATRFSALSLE 429
             Y       V D M  +V+ +  +D ++ +AE                           
Sbjct: 63  SSYHCDMTSVVKDCMRTEVLYVGPDDSILQLAE--------------------------- 95

Query: 430 ERAKSMKVNKPHMLPVLHNGQLVGVLERNDVLEAL 464
                M  +KP + PV+  G++VG + R +VL A+
Sbjct: 96  ----QMLGSKPKIYPVVEQGKVVGTINRTNVLRAM 126



 Score = 22.7 bits (47), Expect = 0.008
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 10/74 (13%)

Query: 406 IDKEQLFPTTSMGIATRFSALSLEERAKSMKVNKPHMLPVLHNGQLVGVLERNDVLEAL- 464
           +D++ +    +M +AT    L        +  NK     V  NG LVG L + D L  + 
Sbjct: 10  MDRQPVLLRANMSLATAVEKL--------LDNNKMGAAVVDDNGDLVGFLSQQDCLAVML 61

Query: 465 -RPIYGERVRIVKD 477
               + +   +VKD
Sbjct: 62  KSSYHCDMTSVVKD 75