Pairwise Alignments

Query, 288 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 14/230 (6%)

Query: 53  LRSVFQPIFD-KQHQVVGAEALVRIFTQHHTQIRPDLFFHSETFADDDKLNVERLSRAIH 111
           L S+FQPI    + ++VG EAL R     ++ +   +   S          +E   R   
Sbjct: 19  LHSLFQPIICLSERRIVGYEALTR--GPSNSPLHSPIALLSVARQAGRLSELELACRRSA 76

Query: 112 IRNFSLSPYRDTRLFLNVLPVAGEQFAYCDISSTLLATRLAELNIPHHRVVMELVEIESG 171
            + F+       +LFLNV P +  + A+    +  L   L +L I   +VV+EL E    
Sbjct: 77  CQRFNEQKLPG-KLFLNVSPESLLESAHQTGRTLQL---LQDLGIAPSQVVIELTEQTPI 132

Query: 172 DE-GMLQMATEKLVANGFQIAIDDFGCKASTPERVAMLRPNIIKLDRQLL----LDFMAG 226
           D+  +LQ A     A GF IA+DD G   S+    + LRP+ +K+DR  +     D +  
Sbjct: 133 DDFQLLQTALHHYRAMGFSIALDDLGAGYSSLRLWSELRPDYVKIDRHFIDGIHQDALKR 192

Query: 227 DCCGLLAGVQLAQKTGAHTVVEGIETAEQLAAMQKLDINMYQGYYLALPE 276
           +  G +  +++A+ + A  + EGIE  E+LA + ++ +++ QGY LA P+
Sbjct: 193 EFVGSI--LKIARASRAQVIAEGIELPEELAVLIEMGVDLVQGYLLARPQ 240