Pairwise Alignments

Query, 224 a.a., DedA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., DedA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (250), Expect = 2e-26
 Identities = 64/218 (29%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 1   MDSVLSIFSALWHHDAFALQNVNLLLLYFCLAL-LIFLESGFLPAAPLPCDSVIVLSGSL 59
           MD +  +  A+ H+D   L N N+ L+   + L  + +E+GF+P A LP D++++L+G L
Sbjct: 1   MDQLYQLAQAMIHNDLAVLSNPNVTLMVSGVILCFLVMENGFIPTAFLPGDTLLILTGVL 60

Query: 60  AATGVLQLHWVLITLFLAGWLGSLVAFYQGSQLKHWRIINNWLAKVPDKQLMMTDKLMRR 119
               VL +  V + L +A ++G+ + + QG  L H ++ +  L+ + DK       L+ +
Sbjct: 61  IYQDVLHMGIVPL-LMVATFIGTAIGYLQGYFLGHTQMYHRLLSHIDDKHQKKALYLIDK 119

Query: 120 YGLIALFFGRFFPVVRSLLPMVMGLRNSVQPLRFLSASAISALCWVLFLVGAGFGI--SL 177
           YG++ L   R+ P VR++ P ++G    V   RFL  + IS++ W+  LVG G+ I  S 
Sbjct: 120 YGILTLLVARYIPFVRTIYPYIIG-ATGVSWSRFLVINFISSVMWITPLVGFGYVISHSK 178

Query: 178 LPTKLEQFATKLLMIAPIFTLILALLTFAASAILKKRE 215
           L  + +     +++  PI  L+  ++T     + KK++
Sbjct: 179 LANEYQTQFMSIIVYLPIVLLVSGIVTLIYKWLRKKKK 216