Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score =  211 bits (538), Expect = 7e-60
 Identities = 110/223 (49%), Positives = 151/223 (67%), Gaps = 1/223 (0%)

Query: 6   KILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGIS 65
           KIL+++DE  I++F+ + +    Y+V  A TAEQG+ L     P L++LDLGLPD DG  
Sbjct: 4   KILVVDDEPQIRKFMRISLGANGYEVLEAETAEQGVMLATGMAPDLVVLDLGLPDLDGQD 63

Query: 66  LTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALR-LAPS 124
               +R  +  PI+V+S R  E DKV+ALD GANDY+ KPFG  ELMARIR ALR  A S
Sbjct: 64  AISMIRTASAVPIIVLSVRSGETDKVEALDRGANDYVVKPFGIGELMARIRAALRPRAGS 123

Query: 125 TESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKEV 184
            E        +G LVLD   + VT+ G+ V+L++ EY++L+LLA+    VLTH+QIL+++
Sbjct: 124 GEEGAGEVLTIGALVLDFARRVVTRGGDEVRLSRKEYDLLRLLAEKADHVLTHRQILRDI 183

Query: 185 WGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRL 227
           WG  +VE   Y+R++V QLR K+E NP++PR I+TE GVGYRL
Sbjct: 184 WGPAHVEDTAYLRVYVNQLRQKLEANPSEPRLIVTEPGVGYRL 226