Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., response regulator transcription factor from Rhodopseudomonas palustris CGA009

 Score =  197 bits (500), Expect = 2e-55
 Identities = 105/224 (46%), Positives = 157/224 (70%), Gaps = 4/224 (1%)

Query: 5   IKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGI 64
           IK+LII+DE PI++ L + +    Y+V  AS  +  L  +AN  P L++LDLGLPD  G 
Sbjct: 6   IKVLIIDDEPPIRKLLRMGLGSQGYEVIEASNGKLALQAMANTPPDLVVLDLGLPDLPGH 65

Query: 65  SLTRELRAWTQT-PIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP 123
            L R++RA +++ PI+V+S+R  EA KV+ALD GA+DY+TKPFG +EL+AR+R ALR   
Sbjct: 66  ELLRQIRARSESVPIVVLSSRGDEAGKVEALDLGADDYVTKPFGMDELLARLRAALRHQL 125

Query: 124 STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE 183
             +  E+  F +GDL +DLV + V  A + VKL+  EY++L++L ++ GKVLTHK +L E
Sbjct: 126 QVQG-ERPVFRVGDLSVDLVRRIVKLADKDVKLSPKEYDLLRVLVQHAGKVLTHKFLLHE 184

Query: 184 VWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRL 227
           +W  + +    Y+R++V QLR K+E +P +P+++LTE G+GYRL
Sbjct: 185 LW--DELTDAQYLRVYVRQLRQKIEPDPERPQYLLTETGIGYRL 226