Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (346), Expect = 1e-37
 Identities = 77/222 (34%), Positives = 133/222 (59%), Gaps = 2/222 (0%)

Query: 6   KILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGIS 65
           +IL++EDE  + R + + +   +++V   +T  Q    + +    L+LLD  L D DG++
Sbjct: 15  RILLVEDEPDLARLIRLNLESLQHEVTQVNTLNQARQQLRSKCFDLLLLDRMLSDGDGLT 74

Query: 66  LTRELRAWTQT-PIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAPS 124
           L ++LR   ++ P M+I+AR+ EAD V  L++GA+DYL KPF   EL AR++  LR + +
Sbjct: 75  LCQQLRQEGKSLPCMMITARDSEADIVLGLESGADDYLVKPFSVLELRARVKALLRRS-A 133

Query: 125 TESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKEV 184
            ++ +Q      +LV+D   ++VT A +P+ LT  E+++L  LA++  +V +  Q+L+ V
Sbjct: 134 QQAADQYALTFDELVIDSKTREVTAANQPLALTAREFDLLYYLAQHPRQVFSRMQLLEAV 193

Query: 185 WGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYR 226
           WG +Y  + H V  H+ +LR K+   P+    + T  GVGY+
Sbjct: 194 WGYSYAGYEHTVNSHINRLRAKLACCPSSNELVQTVWGVGYK 235