Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., osmolarity response regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (353), Expect = 2e-38
 Identities = 78/228 (34%), Positives = 130/228 (57%), Gaps = 5/228 (2%)

Query: 6   KILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGIS 65
           KIL+++D+  ++  L   +    YQV+ A+ AEQ   L+   N HLI+LDL LP +DG+S
Sbjct: 7   KILVVDDDMRLRALLERYLMEQGYQVRSAANAEQMDRLLERENFHLIVLDLMLPGEDGLS 66

Query: 66  LTRELRAWTQT-PIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRL--- 121
           + R LR    T PI++++A+  E D++  L+ GA+DYL KPF   EL+ARI+  +R    
Sbjct: 67  ICRRLRQQGSTIPIVMLTAKGDEVDRIIGLELGADDYLPKPFNPRELLARIKAVMRRQIQ 126

Query: 122 -APSTESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQI 180
             P   + ++     G+  LDL  +++    E + LT  E+ +LK+L  +  + L+  ++
Sbjct: 127 DVPGAPAQQEAEISFGEFSLDLATREMYHGNEAIALTSGEFAVLKVLVTHPREPLSRDKL 186

Query: 181 LKEVWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLV 228
           +    G +Y      + + V++LR  +E +PA PR+I T  G+GY  V
Sbjct: 187 MNLARGRDYSALERSIDVQVSRLRRLIEKDPANPRYIQTVWGLGYVFV 234