Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., two component transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  165 bits (417), Expect = 8e-46
 Identities = 89/225 (39%), Positives = 138/225 (61%), Gaps = 4/225 (1%)

Query: 6   KILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGIS 65
           K+L+++DE  I  F+ + +    ++   A++    L    +  PHLI+LDLGLPD DGI 
Sbjct: 4   KVLVVDDEPQIHTFMRISLEAEGFEYLSATSITTALKQYQSHQPHLIVLDLGLPDGDGIE 63

Query: 66  LTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALR-LAPS 124
           L   LR   +TP++V++AR++E +K++ L+AGANDYL+KPFG  EL+ RI+V +R L  +
Sbjct: 64  LLHGLRQQDKTPVLVLTARDQEEEKIRLLEAGANDYLSKPFGIRELIVRIKVLVRDLVDT 123

Query: 125 TESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKEV 184
           + +++  +F  G L L     Q     + V LTK E+ +L  L  + G++L    +L+ +
Sbjct: 124 SSTIDMLQF--GPLTLQKSSHQCWLNQQEVALTKKEFALLAQLMSHPGQLLKQSDLLRNI 181

Query: 185 WGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLVD 229
           WG  + E  HY+RI V QLR K+ D+  Q + I TE G+GYRL D
Sbjct: 182 WGETHQEDSHYLRILVRQLRKKLNDSDEQ-QLIKTEPGLGYRLTD 225