Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (274), Expect = 2e-28
 Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 24/259 (9%)

Query: 246 LSLARAHAHRTLAHV-----EAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSL 300
           L  A    H+ +A +     EAEK   S ++  LA +SH+L+TP+  ++G    L    L
Sbjct: 237 LGQASREQHQAMAQLIKTREEAEKA-NSAKSEFLAMMSHELRTPMNGVLGMLQLLETTRL 295

Query: 301 HLSTETQQELLTSIAEQGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSRLA 360
              T+ Q E     +E  E L + +  +LD +R   SAL  +       EL+G+      
Sbjct: 296 ---TDEQHEYTALASESTEHLLKVINDILDFSRIERSALELEHIPFNLAELVGSCAQSFQ 352

Query: 361 PRLTHHKVQIE------SQPMLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQ 414
                 K+ ++       Q + V+ D   I Q+L+NL+ NA K+T +G  + + C +Q  
Sbjct: 353 HSAAQRKLGLDLLVPDDMQALQVQGDPTRIRQILVNLIGNALKFTEQG-RVTVQCQWQAL 411

Query: 415 Q-----FTLAVMDNGAGIPDEALPRIFDRFYRVEGNHA---DGTGLGLAICQVIVAAHQG 466
                 FT  V D+G GIP E+L R+FD F + + + +    GTGLGL I + +     G
Sbjct: 412 DHELLWFTCTVRDSGIGIPAESLERMFDAFQQADNSISRRYGGTGLGLPIARTLAERMGG 471

Query: 467 SIRVHNRESGGACFTVTIP 485
           ++R  + E  G+ FT+ IP
Sbjct: 472 TLRAQSEEGQGSVFTLEIP 490