Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., sensory box histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  104 bits (260), Expect = 8e-27
 Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 14/244 (5%)

Query: 262 AEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAEQGERL 321
           A +  + ++T+ LA++SH+++TP+  +IG+   L   +L      Q+ LLT+I   G  L
Sbjct: 226 AAEDADRSKTSFLATMSHEIRTPMYGVIGATELLARSALD---PEQRRLLTTIHSSGRTL 282

Query: 322 NRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSRLAPRLTHHKVQIESQ-----PML 376
              +  +LD+ +  A  L  K    E   L+ + +  +   +    + +E+Q     P L
Sbjct: 283 LSLIDNILDLAKIEAGKLELKPRVFEVRALVSSCMELIRQNIQDKPIVLEAQFSPDVPPL 342

Query: 377 VELDSLLIEQVLINLVENAAKYTPRG--SEIEIACAYQEQQFT-LAVMDNGAGIPDEALP 433
           V+ D   + QVLINL+ NA K+T  G  S +     Y  Q +   ++ D G GIP E   
Sbjct: 343 VKTDMDCLRQVLINLLGNAVKFTEAGKISLLVTTSGYGSQAWLDFSIRDTGIGIPTERQD 402

Query: 434 RIFDRFYRVEGNHAD---GTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVTIPCRQYN 490
            +F  F + +G  +    G+GLGL+IC+ ++ A QG++   ++   G+ F+ ++P   ++
Sbjct: 403 NLFKPFVQFKGAASQRFTGSGLGLSICKNLLEAQQGTLTFTSQPGLGSTFSFSLPLALFS 462

Query: 491 LKEL 494
           + E+
Sbjct: 463 VSEI 466