Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  108 bits (270), Expect = 4e-28
 Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 15/228 (6%)

Query: 267 ESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAEQGE--RLNRS 324
           E  R   +A VSH+L+TPL  + G    + D    L   + + L      QGE   L++ 
Sbjct: 237 EKMRREFMADVSHELRTPLSVLRGELEAIEDGVRTLDQASMKSL------QGEVGMLSKL 290

Query: 325 LTKLLDITRYTASALVPKLDWVEPEELIGTVLS----RLAPRLTHHKVQIESQPMLVELD 380
           +  L +++     AL  +    +  EL+  +      R A R  H ++++    + V  D
Sbjct: 291 VDDLYELSLADVGALTYRKVDCDLAELLTNITDMFEERCAARQLHLQLELAGGALPVHAD 350

Query: 381 SLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVMDNGAGIPDEALPRIFDRFY 440
              ++Q++ NL+EN+ +YT  G  + +  A Q  +  + VMD+G G+  + LPR+F+RFY
Sbjct: 351 PGRLQQLIGNLLENSVRYTDAGGTVHVRAALQGDEVRVDVMDSGPGVDPQQLPRLFERFY 410

Query: 441 RVEGNH---ADGTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVTIP 485
           R E +    + G GLGLAIC  I  AH G++   +  +GG   T+ +P
Sbjct: 411 RGETSRNRASGGAGLGLAICHSIALAHGGTLSADHSPTGGLWLTLCLP 458