Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 887 a.a., ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA from Pseudomonas syringae pv. syringae B728a

 Score =  166 bits (420), Expect = 3e-45
 Identities = 128/476 (26%), Positives = 218/476 (45%), Gaps = 22/476 (4%)

Query: 36  DVAMLFLLLNILSASVLKPRNAYVMMGLSIIDYHYFLLPDYQSFRFENAQYVITYAVLAF 95
           +++++FL   +L A       A    GLS + Y +  +P   S   +  + V+T      
Sbjct: 417 NISLIFLAAVLLVAVRSSMGPALACAGLSFLAYDFLFIPPSFSLNIQREEDVLTLLFFLL 476

Query: 96  SGIFAVNITQAQRKQIEKNKRLQQQHKKYYELACHLSALSTSEDIAQATVKFLSKEKGIV 155
                  +   QR+Q++  +  Q+Q  +  +L+  ++A +  + +  A  +  S  K + 
Sbjct: 477 MSALTGKLAARQRRQLQALRDTQEQTSELLDLSRKMTAATDGKAVFSAAEQHFSGWKELH 536

Query: 156 SAIALYQPQWQWVAQHADFPVAAIELPQP----------PLTDNTSTLVQDEQINAFTLV 205
             +     +  WV +    P+   E  +           P    T TL            
Sbjct: 537 LCLVDRDGEGGWVVETGG-PLTFSEAERAAADWAWKHDQPAGSGTGTLPSGRWWWWPITA 595

Query: 206 DRGTILGVIYFLRYPHERFASPEALRRESKIAPWVRSLLTLSLARAHAHRTLAHVEAEKQ 265
           + G  L ++       + F +     +  ++   +   L  +LARA   + L       +
Sbjct: 596 EEGP-LALLGVCAREGQSFTA-----QHRRLLAALTQPLAQALARAQLAQELEAARLHGE 649

Query: 266 LESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAEQGERLNRSL 325
            E  R+ LLASVSHDL+TPL ++ GS  +L      +  E ++ELL    ++ ERL+R +
Sbjct: 650 TEQLRSALLASVSHDLRTPLTSMRGSIDSLLALGEAIPLEDRRELLEGTRDEAERLDRYI 709

Query: 326 TKLLDITRYTASALVPKLDWVEPEELIGTVLSRLAPRLTHHKV--QIESQPMLVELDSLL 383
             LLD+TR    AL    DWV P +++G+ L+RL   L   +V  Q+  +  L+ + + L
Sbjct: 710 QNLLDMTRLGHGALKLARDWVAPADIVGSALNRLRAVLAPLQVSTQVTGELPLLYVHAAL 769

Query: 384 IEQVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVMDNGAGIPDEALPRIFDRFYRVE 443
           IEQ L+N++ENAA+++P    +++A    + +   +V D G GIP++   +IFD FY   
Sbjct: 770 IEQALVNVLENAARFSPVDGRLQVAAGVVDSELFFSVSDEGPGIPEDERAKIFDMFYTAA 829

Query: 444 --GNHADGTGLGLAICQVIVAAHQGSIRVHNRESG-GACFTVTIPCRQYNLKELYE 496
                  GTGLGLAICQ ++ AH G + V     G G   T+ +P +     EL E
Sbjct: 830 RGDRGGQGTGLGLAICQGMIGAHGGRLSVEEGIDGLGTRITLFLPLQAQPDVELEE 885