Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., histidine kinase from Synechococcus elongatus PCC 7942

 Score =  112 bits (280), Expect = 3e-29
 Identities = 78/217 (35%), Positives = 116/217 (53%), Gaps = 7/217 (3%)

Query: 274 LASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAEQGERLNRSLTKLLDITR 333
           + +VSH+LKTPL  I G   +L     +L++   Q L T+ AE  ER  R L  LLD+ R
Sbjct: 262 VGNVSHELKTPLTVISGYLQSLLRRGDNLNSYQNQALETASAE-AERTIRMLQDLLDLAR 320

Query: 334 YTASALVPKLDWVEPEELIGTVLSRLAPRLTHHKV--QIESQPMLVELDSLLIEQVLINL 391
             +  L  +L       LI  V + +  R+T  ++  Q     ++V  D   +EQ LINL
Sbjct: 321 VDSGNLHFRLMPTVLNTLIAEV-AEMTRRVTGRQIIMQTPKSEIVVYADQNRLEQALINL 379

Query: 392 VENAAKYTPRGSEIEIACAYQEQQFTLAVMDNGAGIPDEALPRIFDRFYRVE---GNHAD 448
           ++NAAKY+ +   + I      QQ  + ++D G GIP     RIF+RFYRV+       D
Sbjct: 380 LDNAAKYSNQDQVVYINLEQSNQQTLIHIIDQGVGIPLAHQSRIFERFYRVDEAMTRSRD 439

Query: 449 GTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVTIP 485
           GTGLGLAI + ++   QG I + ++   G+ FT+ +P
Sbjct: 440 GTGLGLAIAKSLIEGMQGKITLRSKLGEGSTFTIILP 476