Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 772 a.a., sensor histidine kinase transmembrane protein from Sinorhizobium meliloti 1021

 Score =  112 bits (280), Expect = 5e-29
 Identities = 96/331 (29%), Positives = 154/331 (46%), Gaps = 18/331 (5%)

Query: 175 PVAAIELPQPPLTDNTSTL---VQDE---QINAFTLVDRGTI-LGVIYFLRYPHERFASP 227
           PV    +  P  ++++ T    + DE   QIN     D G + +G    L   H+     
Sbjct: 441 PVVERRIADPDRSNHSQTSEVQLADERWLQINERRTRDGGLVSVGTDITLLKRHQVRLRE 500

Query: 228 EALRRESKIAPWVRSLLTLSLARAHAHRTLAHVEAEKQ----LESTRTTLLASVSHDLKT 283
              R  + I     S +TL   +A      A+ +AEK+        ++  LA++SH+L+T
Sbjct: 501 SERRLMATIGDLSASRVTLEQQKAELSIANANYQAEKERAEAANRAKSEFLANMSHELRT 560

Query: 284 PLGAIIGSATTLTDPSLH-LSTETQQELLTSIAEQGERLNRSLTKLLDITRYTASALVPK 342
           PL AI+G +  L D     L +E   E    I E G+ L   +  +LD+++  A  +   
Sbjct: 561 PLNAILGFSEILQDQMFGPLGSEKYHEYSRDIFESGKHLLNVINDILDMSKIEAGHMRIT 620

Query: 343 LDWVEPEELIGTVLSRL---APRLTHHKVQIESQPMLVELDSLLIEQVLINLVENAAKYT 399
            + ++   LI   L      A R     VQ  S  + +  D   ++QVL+NL+ NA K+T
Sbjct: 621 RERIDLAPLIEETLRFTTIPAERKNIRVVQQISSGLTMFADRRAMKQVLLNLLSNAVKFT 680

Query: 400 PRGSEIEIACAYQEQQFTLAVMDNGAGIPDEALPRIFDRFYRVEGNHA---DGTGLGLAI 456
             G  I +         TL + D+G GIP  AL +I   F +V+  +A    G+GLGLAI
Sbjct: 681 NEGGRISLRARKVRGAVTLTIADSGIGIPKGALQKIGQPFEQVQSQYAKSKGGSGLGLAI 740

Query: 457 CQVIVAAHQGSIRVHNRESGGACFTVTIPCR 487
            + +   H G++++H+ E+ G   +V IP R
Sbjct: 741 SRSLTRLHGGTMKIHSAENVGTIISVRIPDR 771