Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  114 bits (285), Expect = 2e-29
 Identities = 78/247 (31%), Positives = 122/247 (49%), Gaps = 11/247 (4%)

Query: 246 LSLARAHAHRTLAHVEAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLT-DPSLHLST 304
           L L  A++   + + E  ++L+  +T   A+VSH+L+TPL  I+G  T+   DP+L    
Sbjct: 192 LKLKEANSELAILY-EKTRELDDIKTQFFANVSHELRTPLTLILGPVTSRQEDPTL---A 247

Query: 305 ETQQELLTSIAEQGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSRLAPRLT 364
             ++ +L  +A     L R +  LLDI +  A  +  +    +   L    LS       
Sbjct: 248 PAEKRVLDMVARNARLLLRHVNDLLDIAKLEAGQMRMQYVRTDVTRLCRFALSHFDSLAE 307

Query: 365 HHKVQ--IESQPML-VELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVM 421
              +   +E+  +L  E+D     +VL+NL+ NA K+TP   EI ++   +     L V 
Sbjct: 308 ERAIAFTLEAPAVLWAEIDPEKFRRVLLNLLSNAFKFTPNQGEITVSLIDRGDDVILRVS 367

Query: 422 DNGAGIPDEALPRIFDRFYRVEG---NHADGTGLGLAICQVIVAAHQGSIRVHNRESGGA 478
           DNG GIP+     +F+RF +V+G       GTGLGLAI +  V  H G + +     GGA
Sbjct: 368 DNGPGIPESMWTAVFERFRQVDGGSDRRHGGTGLGLAIVREFVDLHGGEVSIGQASEGGA 427

Query: 479 CFTVTIP 485
            FTV +P
Sbjct: 428 AFTVVLP 434