Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 898 a.a., two-component system sensor histidine kinase KdbD from Rahnella sp. WP5

 Score =  177 bits (449), Expect = 1e-48
 Identities = 146/493 (29%), Positives = 231/493 (46%), Gaps = 35/493 (7%)

Query: 13  ILVALYAMVTVVGVMYRKDMIETDVAMLFLLLNILSASVLKPRNAYVMMGLSIIDYHYFL 72
           + VAL A++TV+         + ++ M++LL  ++ A       + +   +++I +  F 
Sbjct: 402 LAVALCAVITVMSQWLVPTFDQANLVMVYLLGVVIVALFYGRWPSVLAAVINVISFDLFF 461

Query: 73  LPDYQSFRFENAQYVITYAVLAFSGIFAVNITQAQRKQIEKNKRLQQQHKKYYELACHLS 132
           +    S    +AQY++T+ V+   GI   N+T   R Q    +  +++ +  YE++  LS
Sbjct: 462 VQPRGSLAVTDAQYLVTFGVMLTVGILIGNLTAGVRYQARIARHREKRAQHLYEMSKGLS 521

Query: 133 ALSTSEDIAQATVKFLSKEKGIVSAIALYQPQWQWVAQHADFPVAAIELPQPPLTDNTST 192
              T E IAQ +  F+S      +AI L Q       ++ +    A E+    + D  + 
Sbjct: 522 QSLTPEAIAQTSRHFISSSLNAKTAILLPQ-------ENGELAQPAGEITSIVVDDAIAR 574

Query: 193 LVQDEQINAFTLVDRGTILGVIYFLRYPHERFASPEALRRESKIAPWVRSLLTL------ 246
              D+++ A    D  T+ GV Y L       AS E+    +   P +R LL        
Sbjct: 575 WSFDKKLPAGAGTD--TLPGVPYQLL---PLIASGESRGLLAVEPPNIRQLLVPEQQRLL 629

Query: 247 ---------SLARAHAHRTLAHVEAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTD 297
                    +L R H          E + E  R +LL+++SHDL+TPL  + G A  LT 
Sbjct: 630 QTFTVLIANALERLHLAARAETARLETEREQLRNSLLSALSHDLRTPLTVLFGQAEILT- 688

Query: 298 PSLHLSTETQQEL--LTSIAEQGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTV 355
             L L++E  +     + I +Q     R +  LLD+ R  +     + +W   EE+ G+ 
Sbjct: 689 --LDLASEGSKHAPQASQIRQQVLSTTRLVNNLLDMARIQSGGFNLRKEWQSVEEITGSA 746

Query: 356 LSRLAPRLTHHKVQIE--SQPMLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQE 413
           L  L P L H  ++I+   + +LV  D+ LIE+VLINL+ENA KY   G+ I I     +
Sbjct: 747 LRMLEPVLAHDNIEIDLPKEMVLVNCDASLIERVLINLLENAHKYAGTGATIGIKATPLD 806

Query: 414 QQFTLAVMDNGAGIPDEALPRIFDRFYRVEGNHA-DGTGLGLAICQVIVAAHQGSIRVHN 472
           +   + V DNG GIP  A   IF++F R     A  G GLGLAIC+ I+  H G I   N
Sbjct: 807 EWLEMEVWDNGPGIPAGAEHTIFEKFARGNKESAIPGVGLGLAICRAIIEVHDGRIWAEN 866

Query: 473 RESGGACFTVTIP 485
             +GGA F   +P
Sbjct: 867 GPNGGARFRFRLP 879